Salinimonas marina: IT774_12280
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Entry
IT774_12280 CDS
T07441
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
smaa
Salinimonas marina
Pathway
smaa02020
Two-component system
smaa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IT774_12280
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IT774_12280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smaa03021
]
IT774_12280
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
smaa02035
]
IT774_12280
Transcription machinery [BR:
smaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IT774_12280
Bacterial motility proteins [BR:
smaa02035
]
Flagellar system
Flagellar assembly proteins
Stator
IT774_12280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
GerE
HTH_38
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
QPG04929
UniProt:
A0A7S9DVV9
LinkDB
All DBs
Position
complement(2752867..2753595)
Genome browser
AA seq
242 aa
AA seq
DB search
MNSKAAAYQQQSSKTQLVERHASLVKRIAHHLMARLPASVLVDDLIQAGMIGLLEAAKNF
DGSKGASFETFAGIRIRGAMLDEIRKGDWTPRSVHKNSRAITEAIAQVEKETGRDARDVQ
IAAKLDVSLDSYHQMLNEVNAGKLVGIEDLGVSEDVITTEVNQGNDSPLEDLMQGAFQKA
LAHAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRISQIHSQAMLKLKAKMQSWRA
DS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagcaaagccgctgcctaccaacagcaatccagtaaaacgcaactggtagagcgt
catgcttcactggttaagcgaattgcccatcatttgatggcccggttacctgccagtgtg
ctggtggatgatctgattcaggccggtatgattgggttgttggaagcagcaaaaaatttc
gatgggtcgaaaggcgccagctttgagacattcgccggtattcgtatccgcggagccatg
cttgatgagattcgaaaaggtgactggaccccacgttcagtacacaaaaacagtcgtgcg
atcactgaagcgattgcccaggttgaaaaagaaaccgggcgcgatgcgcgtgatgtccag
atcgccgccaagctcgatgtcagccttgatagctatcatcagatgctcaatgaggtcaac
gccggtaagctggtgggaattgaagatttaggcgtgtccgaagatgtgatcaccactgaa
gtcaatcagggtaatgactcgcctttggaagatttgatgcagggcgcgtttcagaaggcg
ttggcgcatgctattacgaccttgcctgaacgtgaagcgattgtgctgtctctttattat
gatgaagaattaaacttacgcgaaataggcgaagtgctggatgtcagtgaatccaggatc
agccagattcatagccaggcaatgctgaaattaaaagctaaaatgcaaagctggcgtgcc
gatagctaa
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