KEGG   Salinimonas marina: IT774_13745
Entry
IT774_13745       CDS       T07441                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
smaa  Salinimonas marina
Pathway
smaa02020  Two-component system
smaa02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:smaa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IT774_13745
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    IT774_13745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smaa03021]
    IT774_13745
Transcription machinery [BR:smaa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     IT774_13745
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: QPG05175
UniProt: A0A7S9DWI9
LinkDB
Position
3064424..3065908
AA seq 494 aa
MKPSLQLKFSQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLEVDESSDNDGAEK
NNQDSNSDSDNIEASATAGDNMDSGEALEKNDLPDELPIDSTWDEYYSASSAPAPGPGSD
EDQVFQGETTDDIQAHLLWQMRLTHFSETDRAIAMAIIDSIDESGYLTVSVEEILQSVNS
DETEEPVEEDEVECVLKRIQLFDPLGSGSRTPQECLLVQLRQFAPDTPWLEEARSLIEDY
SDLLSSKDYRTLMRKSKLKEDQLREAMRLLQTLNPRPGSALITKEPEYVIPDVSVAKKNG
RWSVELNPDSLPKLSVNQQYAAMSRRARNSSDSQFIRSHMQEAKWFIKSLESRNDTLLKV
ANCIVQQQMGFFEHGPEMMKPMVLNDVAEMVDMHESTISRVTTQKYMHTPRGIFELKYFF
SSHVATESGGECSSTAIRALIKKLVAAETPSKPLSDSKIADVLAEQGIKVARRTIAKYRE
SLSIPPSNQRKSLI
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgaaaccatctttacagctaaaatttagtcaacagttaactatgaccccgcaactgcag
caggccattcggctattgcagttgtcgacactcgaccttcagcaggagattcaggaagcg
ctggactcaaaccctttgctggaagtagatgaaagtagtgacaacgacggggcagagaaa
aacaaccaggacagcaacagcgattccgacaatatcgaggcctccgctacggccggtgac
aacatggactctggcgaagcgctggagaaaaatgatttgccggacgagctgcctatcgac
agcacctgggatgagtattattccgcctcttcagccccggctccggggcctggcagtgac
gaagaccaggtatttcagggtgaaaccactgatgacattcaggctcacctgctgtggcaa
atgcgcctcacccacttttcagaaacagatcgcgccatcgcgatggcgattatcgactca
attgatgagtcagggtatctgactgtatcggtggaagaaattctgcaaagcgtgaacagc
gatgaaaccgaagagccggtggaagaagatgaagtggagtgtgtgttaaagcgcatccag
ttgtttgatcctttaggttccggctcacgcactccccaggaatgtctgctggtgcaatta
cgccagtttgcccctgataccccctggctggaagaagcccgcagcctgattgaggattac
tctgatttactgagcagtaaagactaccgcaccctgatgcgcaaaagtaagctcaaagaa
gatcagctgcgagaggctatgcggttactgcaaaccctgaatcctcgtcctggcagtgcg
ctgatcaccaaagaacctgagtatgtgattccggatgtgtcggtagccaaaaagaatggc
cgctggtcagtagagctaaatccggacagtttgccaaaactgagcgtaaatcaacaatac
gctgcgatgagccggcgggctcgcaacagcagtgattcgcagtttattcgttcgcatatg
caggaagcaaaatggtttatcaaaagcctcgagtcgcgtaatgatacgctgctgaaggtg
gcgaattgtattgtgcagcaacaaatgggcttttttgaacatgggcccgagatgatgaag
cccatggtgctgaatgatgttgccgagatggtggacatgcacgaatcaacgatttcccgg
gtcacgacccagaagtatatgcacacccctcgtggtatctttgagctgaaatatttcttc
tcaagccatgtggctacggagtctggcggcgagtgttcttccaccgccatacgggccctg
attaaaaagctggtggcggctgaaacacccagcaagccacttagcgatagcaaaattgca
gatgtgttggccgagcaaggaataaaagttgcccggcggacaattgcaaaatatcgggaa
tcgttatcgatcccaccgtcgaaccaacgcaaaagcctgatttaa

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