Salinimonas marina: IT774_13745
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Entry
IT774_13745 CDS
T07441
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
smaa
Salinimonas marina
Pathway
smaa02020
Two-component system
smaa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IT774_13745
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IT774_13745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smaa03021
]
IT774_13745
Transcription machinery [BR:
smaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IT774_13745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
QPG05175
UniProt:
A0A7S9DWI9
LinkDB
All DBs
Position
3064424..3065908
Genome browser
AA seq
494 aa
AA seq
DB search
MKPSLQLKFSQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLEVDESSDNDGAEK
NNQDSNSDSDNIEASATAGDNMDSGEALEKNDLPDELPIDSTWDEYYSASSAPAPGPGSD
EDQVFQGETTDDIQAHLLWQMRLTHFSETDRAIAMAIIDSIDESGYLTVSVEEILQSVNS
DETEEPVEEDEVECVLKRIQLFDPLGSGSRTPQECLLVQLRQFAPDTPWLEEARSLIEDY
SDLLSSKDYRTLMRKSKLKEDQLREAMRLLQTLNPRPGSALITKEPEYVIPDVSVAKKNG
RWSVELNPDSLPKLSVNQQYAAMSRRARNSSDSQFIRSHMQEAKWFIKSLESRNDTLLKV
ANCIVQQQMGFFEHGPEMMKPMVLNDVAEMVDMHESTISRVTTQKYMHTPRGIFELKYFF
SSHVATESGGECSSTAIRALIKKLVAAETPSKPLSDSKIADVLAEQGIKVARRTIAKYRE
SLSIPPSNQRKSLI
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatctttacagctaaaatttagtcaacagttaactatgaccccgcaactgcag
caggccattcggctattgcagttgtcgacactcgaccttcagcaggagattcaggaagcg
ctggactcaaaccctttgctggaagtagatgaaagtagtgacaacgacggggcagagaaa
aacaaccaggacagcaacagcgattccgacaatatcgaggcctccgctacggccggtgac
aacatggactctggcgaagcgctggagaaaaatgatttgccggacgagctgcctatcgac
agcacctgggatgagtattattccgcctcttcagccccggctccggggcctggcagtgac
gaagaccaggtatttcagggtgaaaccactgatgacattcaggctcacctgctgtggcaa
atgcgcctcacccacttttcagaaacagatcgcgccatcgcgatggcgattatcgactca
attgatgagtcagggtatctgactgtatcggtggaagaaattctgcaaagcgtgaacagc
gatgaaaccgaagagccggtggaagaagatgaagtggagtgtgtgttaaagcgcatccag
ttgtttgatcctttaggttccggctcacgcactccccaggaatgtctgctggtgcaatta
cgccagtttgcccctgataccccctggctggaagaagcccgcagcctgattgaggattac
tctgatttactgagcagtaaagactaccgcaccctgatgcgcaaaagtaagctcaaagaa
gatcagctgcgagaggctatgcggttactgcaaaccctgaatcctcgtcctggcagtgcg
ctgatcaccaaagaacctgagtatgtgattccggatgtgtcggtagccaaaaagaatggc
cgctggtcagtagagctaaatccggacagtttgccaaaactgagcgtaaatcaacaatac
gctgcgatgagccggcgggctcgcaacagcagtgattcgcagtttattcgttcgcatatg
caggaagcaaaatggtttatcaaaagcctcgagtcgcgtaatgatacgctgctgaaggtg
gcgaattgtattgtgcagcaacaaatgggcttttttgaacatgggcccgagatgatgaag
cccatggtgctgaatgatgttgccgagatggtggacatgcacgaatcaacgatttcccgg
gtcacgacccagaagtatatgcacacccctcgtggtatctttgagctgaaatatttcttc
tcaagccatgtggctacggagtctggcggcgagtgttcttccaccgccatacgggccctg
attaaaaagctggtggcggctgaaacacccagcaagccacttagcgatagcaaaattgca
gatgtgttggccgagcaaggaataaaagttgcccggcggacaattgcaaaatatcgggaa
tcgttatcgatcccaccgtcgaaccaacgcaaaagcctgatttaa
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integrated database retrieval system