Salinimonas marina: IT774_13850
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Entry
IT774_13850 CDS
T07441
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
smaa
Salinimonas marina
Pathway
smaa03410
Base excision repair
smaa03430
Mismatch repair
smaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IT774_13850 (recJ)
03430 Mismatch repair
IT774_13850 (recJ)
03440 Homologous recombination
IT774_13850 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaa03400
]
IT774_13850 (recJ)
DNA repair and recombination proteins [BR:
smaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IT774_13850 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IT774_13850 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IT774_13850 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QPG05194
UniProt:
A0A7S9HCK5
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All DBs
Position
complement(3082848..3084575)
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AA seq
575 aa
AA seq
DB search
MGLSIVRRTVTREPLCPTLHPVLDRVYRGRAIASLDELETKVQALQHYAHLTGTDKAASL
LCQAIYNNQKVVIVGDFDADGATSTAICMLALQQMGLQQVSYLVPNRFDFGYGLSEQIVD
VACDEGAEVIVTVDNGIACLPGVARAKARGATVIVTDHHLPGSQLPEADAIVNPNQPGCE
FLSKNLAGVGVAFYLMLALRARLQADAWFEKQNIPAPNLANLLDIVAVGTVADVVPLDKN
NRILVHQGLQRIRAGKCRPGIRALFEVAGKTLAHVSATDLGFVVGPRLNAAGRLDDMALG
IECLLSDDAMQARFQASELDQLNQQRKTIESDMKAEAEKVIAGLSVEQQQMPPALVLYKE
DFHQGVIGIVAGRMKEKYKRPAIAFAHQDEAIIKGSARSVPGVHIRDVLEEVNTRKPGLI
SKFGGHAMAAGLSLPIAALPEFEATFIKVVSRHLENIDSLHTIMSDGELATSELSLPLAR
ILKQAVPFGQGFEAPLFDGVFEIAHQRLLKQQHLKLILKIGEQQEVDAIAFNVDTSIWPD
TSITQVQLAYQLEVNVFRGKETVQLMVQELAPYED
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggattgtcgattgtccggcgcacagtgacgcgcgagcctttgtgccccacacttcac
ccggtgctggatcgggtttaccgcgggcgggcgattgccagcctggacgagctggaaacc
aaagttcaggcgctgcaacattacgcccaccttaccggtactgacaaagccgccagcctg
ctgtgtcaggctatctacaataatcagaaggtggttatcgtaggcgattttgatgccgat
ggagccaccagtactgctatctgtatgctggccttacagcaaatgggcctgcaacaggtt
tcctacctggtgccgaatcgttttgactttggctatggtcttagcgaacaaattgttgat
gtggcctgcgatgaaggtgccgaggtgattgttaccgttgacaacggcattgcctgcttg
cctggcgtggcccgggccaaagcccgcggggccaccgttattgtcaccgatcatcatctg
cctggttcacagctgccggaggctgatgcgatagtgaaccctaaccaaccaggctgtgag
tttttgtctaaaaacctggccggggtgggcgtggcattttatttaatgctggctctccgc
gcccggctacaggccgacgcctggtttgaaaagcaaaatatcccggcgcccaatctggcg
aatttactcgatatagtggcagtaggcaccgtggccgatgtggtgccgctggataaaaac
aaccgcatcctggtgcatcagggactccaacgcattcgggccggcaagtgccgacccggg
atccgcgcattatttgaagtggccggtaaaaccctggctcatgtgagtgctaccgatctg
gggtttgtggtaggtccacggttaaatgcggccgggcgcctggacgacatggcgctggga
atcgagtgtttgcttagtgacgatgccatgcaggcacggtttcaggccagtgagctggat
cagcttaatcagcagcgtaaaaccatcgaaagcgatatgaaggctgaggcggaaaaagtt
attgccggattaagcgtggaacaacagcaaatgccgccagcgctggtgttgtataaagag
gattttcatcaaggcgtgattggcattgtggccgggcgcatgaaagaaaaatacaaacgt
ccggcgattgcgtttgcgcatcaggatgaagcaattatcaaaggctcggcgcgctcggtt
ccgggggtccatatccgggatgtcctggaagaggtgaatacccgcaaacccggtcttatt
tcaaaattcggggggcatgcgatggcagccggcttgtccttgcccattgcggcgttacct
gaatttgaagccacctttattaaggtggtcagccgccatctggagaatattgactcactg
cataccatcatgagcgacggcgaattggccaccagcgagctcagcttgcccctggcgcgg
atacttaaacaggcggtgccctttggtcagggatttgaagcacccctgtttgacggtgtg
tttgaaattgcccatcagcgtttgctaaaacaacagcatcttaagcttattctcaaaatc
ggcgagcagcaggaagtcgatgcgattgcctttaatgtggataccagtatctggcctgac
accagtatcactcaggttcagcttgcctatcagctggaagtaaatgtgtttaggggcaaa
gaaacggtgcaattaatggtacaggagctcgccccctatgaagactga
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