Salinimonas marina: IT774_15410
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Entry
IT774_15410 CDS
T07441
Name
(GenBank) hypothetical protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
smaa
Salinimonas marina
Brite
KEGG Orthology (KO) [BR:
smaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smaa03019
]
IT774_15410
Enzymes [BR:
smaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IT774_15410
Messenger RNA biogenesis [BR:
smaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IT774_15410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
HA2_N
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
QPG05461
UniProt:
A0A7S9HDD4
LinkDB
All DBs
Position
complement(3429753..3431186)
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AA seq
477 aa
AA seq
DB search
MLEDITPLMLETLAWGSRIEDLALLDIPSAAQCEAARTVLQQLGATDPQHQLTAYGRRLA
LLPCHPRLGHMLLQAHQYKHAGSSPLLQAAVWVAALAQDSVKPKAETTVRETLMNLEHHQ
YQRLQRQASRYLHQLEPGLALASPKTLSSREIGVAVALAYTDLIAYQTDHSQYKLASGKG
ATVAPLLAGSPWLAVLNGQQRDGKMVVSLAEPIAQTEVESWFAARFHQTEKVGYNRVQQR
MEARQVNRFAAIELASKPLPAPTPKHLTRAWRTYLQNLPVAEWPLEPRALQWLQRLALAH
RLHLPQPQAFDEPQAWPDSDNPLALIEPTVLDRALSRCRTWRQLSELGWEQRLQQSLPWP
MQQALDTLLPVRYTVPSGQQHPLDYQSDGQVVLAVRMQEMYGQTEVIRVAQGRQNVVVSL
LSPAGRPLQMTADLGQFWQGSYQEIKKEMKGRYPKHFWPDDPASATPTTRTKRAMQQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgaagatatcaccccactgatgcttgaaacgctggcctggggctcccgtattgaa
gatctggctttgctggatataccttcagcggcacaatgtgaggccgcccggacggtgttg
caacaactgggggccaccgatccgcagcatcagcttaccgcctatggccgtcgcctggcg
ctgcttccctgtcatcccagactggggcacatgttattgcaggcccaccagtacaagcat
gccgggtcttcgccactgctgcaggctgcagtatgggtggcggctctggcccaggacagt
gttaaacctaaagctgagaccacggtgcgtgaaaccctgatgaatctcgaacaccaccag
tatcagcggctgcagcgtcaggcaagccgttatttgcatcagcttgagcccggactggcc
ctggccagccccaagaccttatcttcccgggaaattggtgtggccgtcgcgctggcgtac
accgacctgattgcgtatcagaccgatcacagtcaatacaagctggccagtggtaaaggg
gctacggtagctcctttactggcaggttcaccctggttggcggtattgaacgggcaacaa
cgggacggcaaaatggtggtgagtctggccgaacctatcgctcagacagaggtggaaagc
tggtttgccgcccggtttcatcaaactgagaaggtggggtataaccgtgttcagcagcga
atggaggcccgtcaggtaaaccgctttgcggcgattgaactagcgagtaagccgctgccg
gcaccaacgcctaaacacctgacccgggcgtggcgcacgtatctgcaaaacctgccggtt
gccgagtggccgctggagccccgggcgctgcagtggttgcaacgtctggctctggcccac
cgtctgcatttaccgcaaccccaggcatttgatgagccgcaggcctggcctgacagtgat
aacccattggccttaatcgaaccgacggtccttgatcgggcgctaagccgatgtcgcacc
tggcgtcagcttagcgaactgggttgggagcaacgattacaacagtcgctgccatggccg
atgcaacaggcgctggatacgttgttgccggtacgttataccgtaccctccgggcagcag
catccgctggattatcaaagcgatggacaggtggtgctggcggtcagaatgcaggaaatg
tatggccaaactgaggtcattcgtgtggcccagggccgccagaatgtggtggtgtcgtta
ctgtctccggccggaaggccgttacaaatgaccgccgatttgggccagttctggcaaggc
agttatcaggagattaaaaaagaaatgaaaggccgttacccgaaacacttttggcccgac
gatccggccagcgcgacgcccaccaccagaaccaaacgggcgatgcagcagtaa
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