Sulfurovum mangrovi: LN246_00560
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Entry
LN246_00560 CDS
T09512
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
smab
Sulfurovum mangrovi
Pathway
smab00521
Streptomycin biosynthesis
smab00523
Polyketide sugar unit biosynthesis
smab00525
Acarbose and validamycin biosynthesis
smab00541
Biosynthesis of various nucleotide sugars
smab01100
Metabolic pathways
smab01110
Biosynthesis of secondary metabolites
smab01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LN246_00560 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LN246_00560 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LN246_00560 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LN246_00560 (rfbB)
00525 Acarbose and validamycin biosynthesis
LN246_00560 (rfbB)
Enzymes [BR:
smab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LN246_00560 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
UFH59359
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Position
106051..107079
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AA seq
342 aa
AA seq
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MSNPTTKTILVTGGAGFIGSNFLPYFLEKYPHYKLVNLDLLTYAGNLENLKEVEDHPRYQ
FVQGDICDRELVEKVFVEYDIRGVIHFAAESHVDNSIKNPGVFIETNVNGTFTLIDVAYK
KWMERPFVYKDAYRGCRFHHISTDEVYGSLGKTGFFTETTPYAPNSPYSASKASSDMIVR
SYHHTYGMDTVITNCSNNYGPKQHDEKLIPTIIRNALSGNTIPIYGDGNNIRDWLYVLDH
CKGIDLAYHKGSSGEVYNIGGKNERTNNYIAQQVCSILDELRPKENSSYREQITYVEDRA
GHDRRYAIDATKIERELGWKAEENFESGIVKTVQWYLGRYHD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccaacaactaaaacgatattggtgacaggaggggcaggatttatagggtcg
aactttcttccctattttttagaaaagtatcctcactataagctggtcaatcttgatctt
ttaacctatgcaggaaatcttgaaaacctaaaagaggtagaagatcatcccaggtatcaa
tttgtccaaggagatatctgtgacagggaactggttgaaaaggtttttgtggagtatgat
atccggggtgtgatccacttcgcggctgaaagccatgtagataactctatcaaaaatcct
ggagtatttatcgagactaacgtgaatggaacctttacactcattgatgtagcctataag
aagtggatggagcgaccttttgtatacaaagatgcctatagaggatgccgttttcatcac
atctcaacggatgaggtttatggaagtctaggaaaaaccgggttttttactgaaactacc
ccctatgcccccaactcaccttactcagcatctaaagcctcaagcgatatgattgttcgc
agttatcatcatacctatgggatggatacggttattacaaactgttccaataactacggc
ccaaaacagcacgatgaaaaactgatacctacgatcatccgtaatgcactttcaggtaat
acaattcctatctatggggatgggaacaatatccgtgattggctttatgtactcgaccac
tgcaaggggatcgacttggcttatcataaagggagcagtggtgaggtgtacaatatcggt
ggaaagaatgaacgcacgaacaactatatcgcacagcaggtttgcagtatccttgatgag
ctaaggccaaaagaaaacagcagttatagagaacagatcacttatgtcgaagacagggca
gggcatgataggcgctatgcaatcgatgctaccaagatagagcgtgagcttggatggaaa
gctgaagagaattttgagagcgggattgttaagaccgtgcagtggtatttagggcggtat
catgattaa
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