Sulfurovum mangrovi: LN246_01540
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Entry
LN246_01540 CDS
T09512
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
smab
Sulfurovum mangrovi
Pathway
smab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LN246_01540 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smab01007
]
LN246_01540 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smab03016
]
LN246_01540 (alaS)
Enzymes [BR:
smab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
LN246_01540 (alaS)
Amino acid related enzymes [BR:
smab01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LN246_01540 (alaS)
Transfer RNA biogenesis [BR:
smab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LN246_01540 (alaS)
Prokaryotic type
LN246_01540 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
DUF6926
BST2
DUF6913
Motif
Other DBs
NCBI-ProteinID:
UFH59546
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Position
294626..297190
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AA seq
854 aa
AA seq
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MDIRQKFLDYFESRGHTVVPSAPLIPIDDDGSLLFVNAGMVPFKGIFTGEEPIPNPPRAT
SAQTCIRAGGKHNDLDNVGYTARHHTMFEMLGNFSFGDYFKKEVMAYAWEFVTSPEYLGL
PVDKLWVTVHENDDEAFELWQAHVPADRIMRFGDKDNFWQMGDTGACGPCSEIFYDQGEE
HFNGPEDHMGGEGDRFLEIWNLVFMQYERDAEGNLKPLPKPSIDTGMGFERVAAIKEGVL
NNYHSSLFMPYLEKIGELVGEAYAYEAPNSASYRVIADHLRSTSFLLAQGVNFDKEGRGY
VLRRIMRRAIRHGYLLGLREPFMYKLVDTIGAVMGEQYPYLIEKAEAIKASMKLEEERFF
DTIDAGIKLFEEELENTTDMFNGEVAFKLYDTYGFPLDLTEDMLREKGIALDSEGFDRKM
EAQKAQSKASWKGTGEAAATGDFKELKEQFGQNTFVGYEKQTYQTKILGLLDEHFKQVSS
LQPGSIGWVMLEETPFYAESGGQIGDRGQLESKAKVLDTKLFQGMNLSEVEATETISVDD
SVVAIVDQARNEIVKHHSATHLLHAALYDILGEHISQAGSLVEANRLRFDFSHPQALSAE
EIRTVENWVNEKIARGVSSTTQEMNIDEARALGAKAQFGEKYGESVRVVSMGDVSVELCG
GTHVDNTAEIGLFVISKESGVSAGVRRIEAICGIAATKYLFELQDSLESVKAEVKNQDPI
AGIGKLKEQIKTLKEELQAALNSTKKELSVTEINGVNVIVDEVEAGDIKEMIDEAKNKYP
NIAVMLFQKKGDKVMLACGSKETAIKAGDWIKQIAPVLGGGGGGRPDFAQAGGKDPSKIA
EAKEKALAYLEENL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagacagaaatttctagactattttgagagcagaggacacacggttgtccct
tctgcaccgcttataccgatcgatgatgacggatcactgctttttgtgaatgcagggatg
gtgccgttcaaggggatcttcacaggtgaagaacctatccccaaccctccgcgtgcgact
tcagcacagacctgtatcagagcaggcggtaaacataacgaccttgacaacgtgggatat
acggcaagacaccatacgatgtttgagatgctgggtaacttctcttttggagactatttc
aaaaaagaggtgatggcatacgcatgggagtttgtgacctctcctgagtatcttgggctt
ccggtagacaaactctgggtcacggtacatgagaatgatgatgaagcctttgaattgtgg
caggcacatgttccggctgatcgtatcatgcgttttggagacaaagacaacttctggcag
atgggagatacaggtgcatgtggaccgtgcagtgagatcttctatgaccagggcgaagag
catttcaacggtcctgaagaccatatgggtggagagggagacagattccttgagatctgg
aaccttgtcttcatgcagtatgaaagagatgccgaagggaaccttaaaccgcttccaaaa
ccgagtatcgataccggtatgggatttgaaagggttgcagcgatcaaagagggcgtgctc
aacaactaccactcaagcctctttatgccgtaccttgagaagatcggtgagcttgtaggt
gaagcgtatgcgtatgaagcaccgaactctgcaagttaccgtgtgatcgcagaccacctc
cgttctacctcattcctgcttgctcagggagtcaacttcgacaaagagggacgcgggtat
gtacttcgccgtattatgcgccgtgcgatccgtcacggatacctgcttggactgcgcgaa
ccgttcatgtacaagctggtcgatacgatcggtgcagtgatgggtgagcagtatccatac
cttatcgagaaggctgaagcgatcaaggcttcgatgaagctcgaagaggagagattcttc
gatacgatcgatgcggggatcaaactctttgaagaagagctggagaataccacggatatg
tttaacggtgaagtggcatttaaactctacgatacctacggtttcccgcttgaccttact
gaagatatgctcagagaaaaaggtattgcactggacagcgaaggcttcgatcgcaagatg
gaagcacagaaagcacagtctaaagcaagctggaaaggtaccggtgaagcggctgcaacg
ggtgacttcaaggagcttaaagaacagttcggtcagaacacgtttgtaggatatgagaag
cagacataccagacaaaaattcttggactcctggatgagcactttaaacaggtttcaagt
ctgcagccgggaagtataggatgggtaatgcttgaagagacaccgttctatgcagagtcg
ggcggtcagatcggtgacagaggtcagcttgaaagtaaagcgaaggtactcgataccaag
cttttccaggggatgaacctttcggaagtagaagcgactgaaacgatctctgttgatgat
agcgtggttgctatcgtggatcaggcgagaaacgagattgtcaaacaccactctgcgaca
cacctgctgcacgcagcactctatgatatccttggagagcatatctctcaggcaggttct
ttggttgaggcgaacagacttcgttttgacttctcccatcctcaggcactgagtgcagaa
gagatccgaacggtagaaaactgggtgaatgagaagatcgccagaggtgtctcctctaca
actcaggagatgaatatcgatgaggccagagcattgggtgccaaagcacagttcggtgag
aagtacggtgagagtgtgcgtgtggtaagtatgggagatgtctctgtagagctttgcggc
ggaacacacgtagacaacactgcagagatcggactctttgttatcagcaaagagagcggt
gtcagtgcaggggtaagacgtatcgaggcgatctgtggtattgccgctacgaagtatctc
tttgagcttcaagatagtctcgagtcagtcaaagcagaggtgaaaaaccaggatcctatc
gcaggtataggaaaactcaaagagcagatcaaaacgctcaaagaggagcttcaggcagca
cttaactcaacgaaaaaagagctaagcgtgacagagatcaacggtgtgaacgtcatcgtg
gatgaggtggaagccggagatatcaaagagatgatcgacgaggcgaagaacaagtatccg
aatatcgcagtgatgcttttccagaaaaagggtgataaagtcatgcttgcatgcggaagc
aaagagactgcgatcaaagccggtgactggatcaagcagatcgcaccggtactaggcggc
ggaggcggcggtcgtccggactttgcccaggccggaggtaaagacccgtccaagatcgct
gaagcgaaagaaaaagccttggcatacctagaagagaacctctaa
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