Sulfurovum mangrovi: LN246_01625
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Entry
LN246_01625 CDS
T09512
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
smab
Sulfurovum mangrovi
Pathway
smab02024
Quorum sensing
smab03060
Protein export
smab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LN246_01625 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LN246_01625 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LN246_01625 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smab02044
]
LN246_01625 (ffh)
Enzymes [BR:
smab01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LN246_01625 (ffh)
Secretion system [BR:
smab02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LN246_01625 (ffh)
Eukaryotic Sec-SRP protein
LN246_01625 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
AAA_31
SRP54_N
CbiA
AAA_22
AAA_30
AAA_16
AAA_24
GTP_EFTU
nSTAND3
AAA_15
Zeta_toxin
AAA_33
ResIII
AAA_19
cobW
6PF2K
NACHT
AAA_2
ABC_tran
PA_Ig-like
AAA_5
DO-GTPase1
Helicase_RecD
Methyltransf_PK
SLFN-g3_helicase
APS_kinase
ATP_bind_1
AAA_14
ATPase_2
KTI12
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
UFH59562
LinkDB
All DBs
Position
313027..314385
Genome browser
AA seq
452 aa
AA seq
DB search
MFDTLTDSFKNAIGKIRFHDDEKALKKATAELKKSLLKADVHHKVVKELIKEVELDTKKN
GIGKDQFMAALQRELTDILTIEGAPKGFTFASKPPTVVLMIGLQGSGKTTTTGKLAYFLK
EQKKKKVLVIAADLQRLAAVEQLRQITSGIEVDLVADENASPEQIVKAGLEKAEKELYDV
VLIDTAGRLAIDEALMDELARVKEVAQPDELFYVADAMTGQDAVRTAQTFKEKIGITGVV
LSKFDGDSKGGVALGLSEQVGAPLRFIGAGEKMPDLEQFIPDRIVSRLMGAGDVESLAEK
AAAAIDPKEAKKMTQKIKKGQFNFNDFLDQMDQMKKLGSMKSIMGMIPGMGAMAKQIGDM
DLENSEEIKMIRAMVSSMTAKERENPDLLNNMRKRRIAAGAGLDQMQVNRVLKQFKNAAK
MAKKLSGKGGMKQMQDMMKQMQGGGGFPGMPR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacgttaaccgacagttttaaaaatgccatcggcaagattcgttttcatgat
gacgaaaaagcactcaagaaagcgactgccgaactaaaaaaatcacttctgaaagcggat
gttcaccataaagtggtcaaagagctgatcaaagaggtcgaactggatactaagaaaaac
ggtatcggtaaagaccagtttatggcagcacttcaaagagaactgacagatatccttacg
atcgagggggcaccaaaagggtttacttttgcttccaagcctccgaccgtggtactgatg
atcggtcttcagggttccggtaagacgactacaacggggaaacttgcgtatttcctgaaa
gaacagaagaagaaaaaagtattggtcattgcagctgaccttcagagacttgcagcagta
gagcagcttagacagatcacttcgggcatcgaggtagacctggtagccgatgagaacgca
tcaccggagcagatcgtcaaagcgggccttgagaaagctgaaaaagagctctatgatgtg
gtgcttatcgataccgcgggacgtttggcgatcgatgaagcgttgatggatgagctggca
cgtgtcaaagaggtggcacagcctgatgagcttttctatgttgccgatgcgatgacgggt
caggatgcagtgagaacagcgcagacctttaaagagaagatcggtatcacgggtgtggta
ctctcgaagtttgacggtgacagtaaaggtggggttgcgcttggactgagcgagcaggta
ggtgcaccgcttcgtttcatcggtgcgggtgaaaagatgcctgaccttgagcagttcatt
cctgatcgtatcgtcagccgtttgatgggggcaggggatgtagagtcacttgcagagaaa
gctgccgcggcgatcgatcctaaagaagcgaaaaaaatgactcagaagatcaagaagggg
cagtttaacttcaacgacttccttgatcagatggatcagatgaagaagctcggatcgatg
aagtcgatcatggggatgatcccgggaatgggagctatggcaaaacagatcggtgatatg
gatctggaaaactctgaagagatcaagatgatccgtgcgatggtctcctcaatgacggca
aaagagagagaaaacccggatcttctcaacaatatgcgtaaaagaagaattgcagcaggt
gcaggactcgatcagatgcaggtcaaccgtgtactcaagcagtttaaaaatgctgcgaag
atggctaaaaagctttcaggcaagggcggcatgaaacagatgcaggatatgatgaagcag
atgcaaggcggtggcggattcccgggtatgcctagatag
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