Sulfurovum mangrovi: LN246_01720
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Entry
LN246_01720 CDS
T09512
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smab
Sulfurovum mangrovi
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smab03016
]
LN246_01720 (truB)
Enzymes [BR:
smab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LN246_01720 (truB)
Transfer RNA biogenesis [BR:
smab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LN246_01720 (truB)
Prokaryotic type
LN246_01720 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
UFH59581
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All DBs
Position
complement(329490..330332)
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AA seq
280 aa
AA seq
DB search
MNRLFVVNKPIFRSSNGYMGYVKRKYGTKKVGFSGTLDPFATGCLIVATGVYTKLFQYLD
KTPKSYRATLWLGANSPSLDIENVDSIQEVAPFSEEQVKEVLRSLEGELTYYPPKFSAKK
IGGKRAYELAREGKEVALKTITSTIHKMKFIHYTHPFIHFEATVSEGTYIRSLGAIIADR
LGVDATLSSLHRIHEGAFRYEEERAVNPFQHLAIPINLYSGDENYLELGRKLSVEYFEKK
EDGTYLIETSNFFAIIEIKEGKVSYKLNRLPKFEEDTCTA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaataggttgtttgtcgtaaacaagccgatcttccgttcatccaacggttatatgggg
tatgtgaaacgcaaatacggcaccaaaaaggtaggcttttcagggacacttgaccctttt
gccacgggatgcctgatcgtcgctacgggtgtctataccaaactctttcagtatcttgat
aaaaccccgaagagctaccgtgccacactttggcttggggcaaactcaccgagtctcgat
atcgaaaatgtagactccatccaggaagtggcgcctttcagcgaggagcaggtcaaagag
gtattgcgttcgctggaaggtgaactgacctattaccctcccaagttctccgccaaaaag
atcggcggcaagcgtgcctatgaactggcacgcgaaggcaaagaggtagcactcaaaacg
atcacctctacgatccataagatgaagtttatacactacacccacccctttatacatttt
gaagcaacggtgagtgaagggacctatatacgaagcctcggagcgatcatcgcagacaga
ctgggcgtggatgcgacactctcctctctccaccgtatccatgagggggcgttccgctat
gaagaggagagagccgtcaaccccttccaacacctcgccatccccattaacctctatagc
ggggatgagaactacctggagctcgggagaaagctctccgtggagtattttgaaaagaag
gaggatggcacctatctgatagagacctccaacttctttgccattatagagatcaaagag
ggaaaagtgagctacaagctcaatagactacccaagtttgaggaggatacatgtacagca
taa
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