Sulfurovum mangrovi: LN246_01805
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Entry
LN246_01805 CDS
T09512
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
smab
Sulfurovum mangrovi
Pathway
smab00550
Peptidoglycan biosynthesis
smab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LN246_01805 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smab01002
]
LN246_01805 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smab01011
]
LN246_01805 (dacB)
Enzymes [BR:
smab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LN246_01805 (dacB)
Peptidases and inhibitors [BR:
smab01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LN246_01805 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
smab01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LN246_01805 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
SPOR
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
UFH59598
LinkDB
All DBs
Position
347568..349277
Genome browser
AA seq
569 aa
AA seq
DB search
MRGILIWFVVSVWLFALPADIQYFLNKSKLPSKDVSIYIKELGSDRVVASLNADKIRKPA
SVIKVVTAYGALLKMGFDYRWPTQFYTNGALHSGSLEGDLVVKGHGDPSFGSDDLPEIVE
QIKQRGIHQIHGDVVIDRSYFDVGDKDSAHFDNYPYSAYNAWPDAMMFNERTSTVCITPR
KKSAHKEIEDPSYKVVNRVKFVNRSCRGKYAWAGSKVDMQSPVPQLILTGELSKHCKERQ
VCKIVTKPYKAFYYALKEALEKEGIKITGGLKLSRVPPSAKLFYIHRSEPLEEIISKALK
ESNNIYARHLLLLTGAKVYGAPATVEKGRKAVINLLKSQGALRSGAFFLDNGSGLSRRSE
MSARMFSEVYESAYRVLGTRWMETLSIAGKDGTIKQRYRYKPAQKRAWMKTGTLKYVKNI
GGYVKDRAGNYYSVVILVNTKRGRFRAVELQDSIINWLAQSRKTPNEDSAKRASKQVDRP
ATIETKEASSTPKKGKKTSGNYYIQIASVTKKPDSHYLSKIEKSGFSYKVVYEKRYKVLI
GGYPSRESAQKALPKIRQKFNKGAFIVTR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgagaggtatccttatatggtttgtggtctcagtctggctttttgcgcttcctgcagac
attcagtactttctaaacaagtcaaaacttccgagtaaagatgtcagtatctatatcaaa
gagcttgggagtgaccgggtagtggcatcactcaacgcagataagatacgcaaacctgcc
tcagtgatcaaggtcgtaaccgcctatggggcgctgttgaagatggggtttgattaccgt
tggccgacacagttctatacgaatggagcgttgcattcaggaagcctggagggtgacctt
gtcgtcaaagggcatggcgacccctcttttggctctgatgatctgccggaaattgtcgag
caaatcaaacaaagaggtattcatcagatccatggggatgtggtgatagatagaagctat
ttcgatgtaggggataaggacagtgcacactttgataactacccttacagtgcctataat
gcatggcctgatgcgatgatgttcaatgaacgtaccagtacggtctgtatcacaccccgt
aagaagtctgcccataaggagatagaggatccaagctacaaggtagtcaacagagtgaaa
tttgtcaacagatcatgccgtggaaaatatgcatgggcaggttccaaagtagatatgcaa
tcaccagtaccccagctgatactgacaggtgaactttcaaaacactgtaaagagcgtcag
gtatgcaagatcgttaccaaaccctataaagctttctactatgcactcaaagaggcactg
gagaaagaggggatcaagatcactggaggattgaagctttcgcgtgttcccccgagtgcc
aagcttttctatatccaccgctcagagccccttgaagagatcatctcaaaagccttaaaa
gagagtaacaacatctatgccagacacctgttgctactcaccggtgcaaaggtctatggt
gcaccggctacggtagagaaggggagaaaagccgtgatcaacctgctgaaaagtcagggt
gccctgcgttcaggagcatttttcctggataacggttcggggctctccagacgttctgaa
atgtctgcaaggatgttttctgaagtctatgagagtgcctacagggttttaggtacccgc
tggatggagaccctctctatcgcagggaaagacggtacgatcaaacaacgttaccgctat
aaaccggcgcaaaaaagagcctggatgaaaacaggaacactcaaatatgtgaaaaatatc
ggcggctatgtcaaagacagagccgggaactattacagtgtcgtgatcctggtcaataca
aaaaggggaagattccgcgcggtggaactgcaggacagtatcattaactggttggcacaa
tccaggaaaacaccaaatgaagatagcgccaaaagagcttcaaaacaagtggaccggcct
gctactatagagacaaaagaggcatcctctacaccgaaaaagggtaaaaaaacttcaggg
aactactatatacagatagcgtccgtgacgaagaagccggatagtcactatctctccaag
atagaaaagagcggctttagctataaagtagtctatgagaagcgctacaaggtactgata
ggaggatatccaagcagggaaagtgcgcaaaaagcactaccgaagatacgtcagaagttc
aacaagggtgcgtttattgtaacaaggtaa
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