Sulfurovum mangrovi: LN246_04700
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Entry
LN246_04700 CDS
T09512
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
smab
Sulfurovum mangrovi
Pathway
smab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LN246_04700 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smab03400
]
LN246_04700 (uvrA)
DNA repair and recombination proteins [BR:
smab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LN246_04700 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LN246_04700 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_29
nSTAND3
RsgA_GTPase
AAA_16
APS_kinase
AAA_21
DnaJ_CXXCXGXG
AAA_25
AAA_33
Viral_helicase1
Glyco_transf_61
Motif
Other DBs
NCBI-ProteinID:
UFH60148
LinkDB
All DBs
Position
934376..937204
Genome browser
AA seq
942 aa
AA seq
DB search
MSDIKKDMIQVFGAKENNLKNIDLEIPKNKLVVFTGISGSGKSTLAFSTLYAEGQRRYIE
SLSSYARQFLGRVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARV
GQQHCHECGKPISSMSASDIIEEVLKLPNGAKLVIMAPLVKEKKGTFADMIESLRHKGYV
RAMIDGVMVRLDDEIELSKTKKHTIKVVIDRVVVKEESRDRIGQDVEKALKESFGEVEVE
VMNHEEIGFEHQHMHYSEHLACFDCKLSFEPLEPVSFSFNSPKGACPACDGLGIRYAIDL
KKVIDPDLSIDKGAVKIMYGFNKSYYTKFLNAFCEQNGIDITLPYSELAEHEQKAILYGV
GGVVDFTWKRHKLKREWPGVVKFAHEMFKDEKDMSEYMTEKVCDKCNGHRLRPRSLAVKI
EGKNIADIIDMPIDKSYAYFEDEKSFSHLNEQQRLIAEPILKELYERLFFLYDVGLGYIT
LSRDARTISGGEAQRIRIASQIGSGLTGVMYVLDEPSIGLHERDTMKLIRTLQSLRDKGN
SVIVVEHDKETIAAADHIVDIGPGAGEFGGQVVFSGSTSALKKAKTLTADYMYGRKDVSY
THDKHQEKWIEIKNVTLNNIENLSAKIPLHNFVCITGVSGSGKSSLILQTLLPVARELLN
HAKKVNKIDGVEINGLDSLDKVIYLDQSPIGRTPRSNPATYTGVMDEIRKLFAQTKEAEL
RGYKVGRFSFNVKGGRCEKCQGDGQIKIEMHFLPDVMVKCDACNGTRYNAQTLEVLYKGK
SIADVLAMSVAEALEFFKAIPTIAVKLKTLQDVGLDYITLGQNATTLSGGEAQRIKLSKE
LSRKDTGNTLYVLDEPTTGLHFADVDRLTGVLHHLVELGNSVVVIEHNLDMIKNADYIID
MGPEGGNKGGLIIAEGTPEALAREYKETGSYTGEYLKKELGV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatataaaaaaagatatgatacaggtttttggggcaaaagagaataatcttaaa
aatattgaccttgaaatacctaaaaacaaactggtagtctttacaggaatctccggttca
ggaaagtcgacattggctttctctacactctatgcagaggggcagcgccgctatatcgag
tctctctcctcctatgccagacagttcctcggccgagtaggaaaacccgatgtggataag
atcgaggggcttacccctgccattgcgatcgaccagaagaccacctctaaaaacccgcgt
tctacggttggaacgatcacagagatctatgattatctcagacttctttttgccagagtc
ggacaacagcactgtcatgagtgtggtaaaccgatctcttcgatgtcggcaagcgatatc
atcgaagaggtactcaaacttcccaacggggcaaaactggtcattatggcgcctctggtc
aaagagaaaaagggtacctttgccgatatgatcgagtcactgcgccataaagggtatgta
cgtgcgatgatcgacggtgtgatggtacggcttgatgatgagatcgaactctcaaagacc
aaaaaacatacgatcaaggtcgtgatcgacagggtagtggtcaaagaggagagtcgagac
cgtatcgggcaggatgtagagaaagcgctcaaagagagcttcggtgaagtagaggtcgag
gttatgaaccatgaagagatagggtttgagcatcaacatatgcactactccgagcacttg
gcctgttttgactgtaagctcagttttgaacccttggaaccggtcagtttctccttcaac
tcgcccaaaggggcatgtccggcatgtgacggactcggtatacgttatgccatcgacctc
aaaaaagtgatcgatccggacctgagtatcgacaagggtgcggtgaagatcatgtacggg
tttaacaaaagctactataccaaatttctcaacgctttttgtgaacaaaacggtattgat
atcactctgccttacagtgaacttgcagaacacgagcagaaagcgatcctctatggggta
ggcggagtggtagacttcacctggaaacgccataagctgaagcgtgagtggccgggggtc
gtaaagttcgcgcatgagatgttcaaagacgaaaaagatatgagcgagtacatgaccgag
aaggtgtgtgataaatgtaatggtcacaggctgcgccctcgttctcttgccgtaaagatc
gaagggaagaacatcgctgatatcattgatatgccgatcgataaatcttatgcctacttc
gaggatgaaaagagtttttctcacctgaacgagcaacagcgtctcatcgctgaaccgatc
ttgaaagagctctatgagaggctcttctttctttatgatgtagggttggggtatatcaca
ctcagccgtgatgcacgtacgatctctggaggagaggcacagcgtatccgtatcgcttcc
cagataggatcgggattgacaggggtgatgtatgtccttgatgaaccgagtatcggactt
catgagcgtgatacgatgaagctgatcagaacactccagtccctgcgtgataaaggcaac
agtgtgatcgtggtggaacacgataaagagacgatcgcagcagcggatcatatcgtcgat
atcggtccgggagcaggggaattcggcggtcaggtcgttttctcggggagcaccagcgca
ctgaaaaaagcaaaaacgttgactgctgattatatgtatggccgaaaagatgtctcctat
acccatgacaaacatcaggagaagtggatcgagatcaaaaatgtgacactgaacaatatt
gagaacctcagtgccaaaataccgctgcataattttgtctgtattacgggtgtgagcggg
agcggaaagagttccttgatcctgcagacacttctccccgtagccagagaactgctcaat
catgcgaaaaaagtcaataagattgacggagtagagatcaatgggctggattcactggat
aaagtgatctatcttgaccagagccctatcgggcgtaccccgcgttccaatcctgcgacc
tatacaggcgtgatggatgagatacggaaactctttgcacagaccaaagaggcagaactt
cgtggctataaagtagggcgtttctcattcaatgtcaaaggcggacggtgtgaaaagtgt
cagggggatggtcagatcaagatcgagatgcacttcctgcctgatgtgatggtgaaatgt
gatgcatgtaacggtacacgctacaatgcacaaacccttgaagtactctataaaggcaag
tctattgcggatgtacttgcaatgagtgtcgccgaagcattggagttcttcaaagcaata
cctacgattgcggtgaagctcaagacacttcaggatgtaggacttgactatatcacactg
ggacagaatgctaccacgctctcgggcggagaagcccagcgtatcaagctgagtaaagag
ctgagccgtaaagataccggtaatacactctatgtgctggatgaaccgacgaccggactg
cactttgccgatgtagacaggttgaccggggtactgcatcacctggttgagcttggaaat
tctgtggtggtcatcgaacacaatcttgatatgatcaagaatgctgactatattatcgat
atgggacctgaaggcgggaataaaggtggactgatcattgcagagggaacgcctgaagcg
ttggccagagagtataaagaaacaggaagctacacaggcgaatatctgaagaaagagttg
ggagtgtag
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