Sulfurovum mangrovi: LN246_04795
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Entry
LN246_04795 CDS
T09512
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
smab
Sulfurovum mangrovi
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smab03016
]
LN246_04795 (truD)
Enzymes [BR:
smab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LN246_04795 (truD)
Transfer RNA biogenesis [BR:
smab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LN246_04795 (truD)
Prokaryotic type
LN246_04795 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UFH60167
LinkDB
All DBs
Position
complement(959355..960437)
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AA seq
360 aa
AA seq
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MQKTYAYTHHPINFDFKQTIERFFVEELPLYSFSGSGNFLILKIKKTDMSTWKLIHVLSK
ATGLDERDIGYAGLKDKNATTIQYISLPKKYEKELNKNLTTERIEILERTYNKAPIKIGH
LKGNSFSIVLHNIASKDAKFFRTTALKMQKEGFPNYYGYQRFGEDSHSYEQGKEIAHSGK
KLKGSKEKLLVSAYQSHLFNEWLSMRVKLSSTITKYPAEKAAKKLDYPLELVKVLAQQPQ
FFKLFLGDMLQSYPYGKTIPLKEMTKSAVMFSQAKLSPTGLLCGANVERAKSDAYHLEAP
FDDRELSSLKGDRRYAWIWPSEVETCYESERKTLTVKFSLPKGAYATTFLEEIGKFSLKP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaacatacgcctatacccaccatcctatcaactttgacttcaaacagacaatc
gaacgcttctttgtagaagagttacccctttacagtttcagcggttcaggcaacttcctg
atcctcaagatcaaaaagaccgatatgagtacatggaaactcatccatgtcctctccaag
gctacaggtttggatgaacgtgacatcggttatgccggcctcaaagataaaaatgccaca
acgatccagtacatctcactgcctaaaaagtatgaaaaagagctgaataaaaacctcacg
actgaacggatagagattttggagagaacctataacaaggcacctatcaagataggacat
ctcaagggaaacagcttttccattgtccttcacaacattgcttccaaggatgcgaagttc
ttccgtaccactgccctgaaaatgcaaaaagagggtttcccgaactactacggctaccag
agattcggtgaagacagccactcctatgagcaaggaaaagagatcgcacacagcggtaaa
aaactcaaaggaagtaaggaaaaacttctcgtatccgcctaccagagccacctttttaat
gagtggctgagtatgcgtgtcaaactctcatccactatcaccaaatatccggctgaaaaa
gcagcaaaaaaacttgactatccgttagagctggtcaaggtccttgcacaacaaccgcag
tttttcaaactttttctgggagacatgctgcagtcctacccctacgggaagacaatcccg
ctcaaagagatgacaaaaagtgcagtcatgttttcacaagcaaaactctcacctacaggt
ctgctctgcggagccaatgtagagcgtgccaaaagtgatgcgtatcacctggaagcgcct
tttgatgacagagagctcagttcgcttaagggagacagaagatatgcctggatctggcca
agcgaggtggagacctgctatgagagtgaaagaaaaacacttacggtaaagttctctctc
ccaaaaggggcgtatgcgacgacatttttggaagagatcggaaagttttctttaaaacca
taa
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