Sulfurovum mangrovi: LN246_08415
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Entry
LN246_08415 CDS
T09512
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
smab
Sulfurovum mangrovi
Pathway
smab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN246_08415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smab03000
]
LN246_08415
Transcription factors [BR:
smab03000
]
Prokaryotic type
Helix-turn-helix
Other families
LN246_08415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
GAF
AAA_5
AAA_2
AAA
Mg_chelatase
GAF_3
AAA_16
HTH_50
bpMoxR
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UFH58371
LinkDB
All DBs
Position
1635084..1636718
Genome browser
AA seq
544 aa
AA seq
DB search
MLPVDFPEECRACSLMFAYKEIELLYDIAVLLSSSENIKESVEKGMRMLKHHGYLDRCAL
FLLNEDKTLLEPYASIDLTPQQTSMAVYKIGEGATGLAAQSAEPIVIENIHNNINYLNKM
GALHTSLISYVAVPIIQKDGVVGVISANLRKEAPLDFDEIVRMLTILGSISIGALNVHRR
FSKEKEDIQDLKTYYRDEMLSEYKFENIIGRSTVMQQVFSILETVAPSDATILVRGETGT
GKELIAAAVHNISPRKNGPFIKLNCAAISETLLESELFGHEKGAFTDAKEMRKGRFELAD
GGTLFLDEIGDITPALQVKLLRILQEQEFERVGGTKTIKTNVRLVAATNRNLEKMVKNGE
FREDLFYRLNVIPVNLPPLRERYEDIQLLIEHYLKKYMREHHKEMFFSKPALEILLEYPW
PGNIRELQNTMERIVLICPQGELQPEMLNHVMPFNFQKMHMPQETVTPPAKQQETTKEDS
NETETYTKIEEQASLTKSSLQEMEKEAIIQALVENRGIQTKAAKQLGMTARQIGYKIKKY
GIDL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttaccagtagattttccggaagagtgtagagcctgttccctaatgtttgcctataaa
gagatagagctgctctatgatattgctgtactccttagcagttctgaaaatataaaagag
agtgtagaaaaagggatgcgcatgcttaaacaccacggttaccttgaccgttgtgcactc
tttttgctgaatgaagacaagacgcttcttgagccttatgcttccatcgatctcaccccg
caacaaacgagtatggctgtgtataaaatcggagagggtgcaacggggcttgcggcacag
agtgcagaacccatcgtgatcgaaaacattcataacaatatcaactatctcaataaaatg
ggagcactgcatacttcgctcatctcgtatgtggctgtaccgatcatccaaaaagacggt
gtcgtaggcgtgatctctgcaaacctcagaaaagaggccccgttggactttgatgaaatc
gtaaggatgttgacgatactcggatcgatctctatcggtgcgctcaatgtacatagacgc
ttttcaaaagagaaagaggatatccaggatctcaaaacctactatagagatgagatgctg
agtgaatataagtttgaaaacattatcgggagaagtacggtaatgcagcaggtattcagc
attcttgaaacggtggcaccttcagatgcgacgatcctggtgagaggagagaccggtacg
gggaaagagctgattgcagcggcggtgcataatatcagccccagaaaaaacggaccgttt
atcaaactcaactgtgcagcgatcagtgaaacactgctcgaatcagagctgttcggtcat
gaaaaaggggcctttaccgatgcaaaagagatgcgtaaagggcgttttgaactggcagac
ggcggaacacttttccttgatgagatcggggatatcacaccggcactgcaggtcaagctg
ctgcgtatccttcaagagcaggagtttgaacgtgtaggcggtacaaaaacgatcaagacc
aatgtacgcctggttgcagcaaccaacagaaatcttgagaagatggtcaaaaacggtgaa
ttccgtgaagatcttttctaccgtctcaatgtcataccggtcaatcttccgccgcttcga
gaacgttatgaggatatccagttgctgatcgaacactatctgaaaaaatatatgcgtgag
caccacaaagagatgtttttttcaaaaccggcactggaaatcctcctcgaatacccgtgg
cccggaaacatcagggagcttcaaaatacgatggagcgtatcgtactgatctgtcctcag
ggagagctgcaaccggagatgctcaaccacgtgatgccgtttaacttccaaaaaatgcat
atgccccaggagacggtaaccccaccggcaaaacaacaagaaacgacaaaagaggacagt
aatgagacagaaacctacacaaagattgaagaacaggcatctctgacaaaaagcagcctg
caggagatggaaaaagaggcgattatccaggcattggtagaaaaccggggaattcagaca
aaagcagccaaacaacttggtatgacggcaagacaaattggttacaagatcaaaaaatac
ggcatagatctctag
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