Sulfurovum mangrovi: LN246_08450
Help
Entry
LN246_08450 CDS
T09512
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
smab
Sulfurovum mangrovi
Pathway
smab02020
Two-component system
smab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN246_08450 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LN246_08450 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smab03021
]
LN246_08450 (rpoN)
Transcription machinery [BR:
smab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LN246_08450 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
LacI
HTH_36
HTH_3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UFH58378
LinkDB
All DBs
Position
complement(1642718..1643992)
Genome browser
AA seq
424 aa
AA seq
DB search
MAIKQVFNLKQKQIPRLSMQTWLPLLQCSLSDLEKHIQNIANENPCLEVNSGFEVAESSS
SSAHEAYLSYQNRVSNASSDEIEWMSISTQSLYEKLDEQIAAPLFPTPISQKIAKQIIFY
ISDEGYFEGDIEEIAAQCGVSAAQVESVRQRFAYLQPYGVGARDYKESFLFQLNEFDLDD
DMSLLLSAMIIQFESLEKFLNHPRASEAKEILKHLKNPPAIKYMESEPPILPDLFVYFDQ
EGLTIKMNHSFYPDLKVTQIDKYENFAKQKFKEARELVKLLDLRKSTLYNITLVLIEKQY
QFFMGGTLNPLKLQDVAEELGFNESTISRAINGKYLETEQGIFSFKEFFSNAIGNVSTAE
LKEFIQRLIHSEDKSKPYSDKVIHEMLEGRFGIQMVRRSIAKYRQELDIPSFKERKFLYQ
LEML
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaagcaagtctttaatctcaaacaaaaacagataccgcgtctctcaatgcag
acatggttgcccttgctgcagtgttcactctcggatctggaaaaacatatacagaatatc
gccaatgaaaacccgtgtcttgaagtaaattccgggtttgaagtagcggaaagttcatca
agcagtgcacacgaggcctacctctcctaccaaaaccgtgtctccaatgcatcaagtgat
gagatagagtggatgagtatatcgacgcagtcgctttatgaaaaactggatgaacagatc
gctgcaccgcttttccctacaccgatctctcagaagatcgcaaaacagatcatattttat
atcagtgatgaggggtattttgaaggggatatcgaggagatcgccgcacagtgtggtgtc
tctgctgcacaggtagagtcggtacgacagcgttttgcctatctacagccgtacggggta
ggggcaagggactataaagagtcctttctgtttcagctcaatgagtttgacctggatgat
gatatgagtctgctgctcagtgcaatgatcatacagttcgagtctttggagaagtttctg
aaccatccaagggcttcggaagcaaaagagatactcaaacatcttaaaaatccgccggcg
atcaagtatatggagagtgaaccgcctatcctgcctgatctttttgtctattttgatcaa
gaagggttgacgatcaagatgaatcattcgttttatcccgatctcaaagtgacacagatc
gacaaatatgagaatttcgcaaaacagaaatttaaagaagccagagaacttgtcaagctc
ctggatctgagaaagagcacactctacaatattacactggtactgatagagaagcagtac
cagttttttatgggcggtacgttaaaccccctgaaacttcaggatgttgcagaagagctt
ggatttaacgaatcgacgatatcccgggcgatcaacggaaagtatctggagacagaacag
ggcatcttctccttcaaagagttcttctccaatgcgataggcaatgtctctaccgcagag
cttaaagagtttatccaaaggttgatccactctgaagataaaagcaaaccctatagtgat
aaggtgatccatgagatgctcgaaggacgtttcggtatccagatggtacgaaggtccatt
gccaagtaccgccaggagctggatatcccttcctttaaagagagaaagtttctttatcag
cttgagatgctctaa
DBGET
integrated database retrieval system
