Sulfurovum mangrovi: LN246_11200
Help
Entry
LN246_11200 CDS
T09512
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
smab
Sulfurovum mangrovi
Pathway
smab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LN246_11200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_2
Big_12
Big_3_3
DUF4165
FlgD_ig
Glucodextran_B
Wzt_C
Big_3_5
Motif
Other DBs
NCBI-ProteinID:
UFH58902
LinkDB
All DBs
Position
2182787..2187868
Genome browser
AA seq
1693 aa
AA seq
DB search
MGRAITIIVKEGQNVISSNSVAEGSGRPLVIKAKSGQSYELKDMTKGVAPDEIYVMRDGK
NLKIKIGKREKRSNDTDDTADIIIEEYFDHDSSLIGAAENGEYYNYIPQGANPEASYYSL
GGETIVESETDWLPIILGALAVGAIAAAAGGGGGGGGGEEDTTPPDHLTISVYNDDKEPD
EIIIDTETSSTVNSTASIPATNDNTPTIKGNTEAGADVTITFKNSAGQDILTGTVQADYN
GNYQFVPDTELPDGQYYVTAVAKDAAGNALPESTGVFEIDTVAPDAPILDLTDGSDISGT
AEPGTLITITDGNGNPIGTTTTGQDGYFSYTPDEPIPDATVIEATATDAAGNESTPGTTT
VDASIADAPIIYDDVAPVIGEIHNNDTTNDTQPEISGEAGSVPENVLVEIYDNGIKIGET
TSNPDGSWSFTPTSEFANGSDHSITYTKNGGTNHSPAVNFTVDTTAPDAVSVVVTDDVLP
IIGEIADNGITDDTTPTISGTTEPGASVTIKDGDTELGTVTADSNGDYEFTPTIPLNEGE
HTITVTATDAAGNSVNSDTTNFTVDTTAPDSVSMVITDDVAPVIGEITENAITDDTTPTI
SGKTEPDATVMIKDGIVVLGTVTADANGDYEFTPTIPLDEGSHAISVTASDAAGNSVESG
TIHFTIDTDAPDSVAVAITGIDEDTATAGDFITSDNTLVFSGTNGALGDGEKVQISLDGG
VTWTDVDQNGTQWSYDNTSNTMVDGTYTVEARVIDAAGNVGNTDSQSVVVDTTPPDSVAV
AITGIDEDTATAGDFITSDNTLVFSGTNGALGDGEKVQISLDGGVTWTDATQSDATHWSY
DNRANTMADGTYTVEARVIDAAGNVGNTDSQSVVVDTTPPDSVAVAITGIDEDTATAGDF
ITSDNTLVFSGTNGALGDGEKVQISLDGGVTWTDATQSDATHWSYDNRANTMSDGTYTVE
ARVIDAAGNVGNTDSQSVVVDTTPPDSVAVAITGIDEDTATAGDFITSDNTLVFSGTNGA
LGDGEKVQISLDGGVTWTDATQSDATHWSYDNTANTMADGTYTVEARVIDAAGNVGNTDS
QSVVVDTTPPDSVAVAITGIDEDTATAGDFITSDNTLVFSGTNDPLGDGEKVQISLDGGN
TWIDTTKTDATHWSYDNTANTMPDGTYTVEARVVDAAGNVGNTDSQSVVVDTEAPDSVTV
AITGINEDTATAGDFITSDNTLVFSGTNTALGDGEKVQISLDGGNTWTDTTKTDATHWSY
DNTANTMPDGTYTVEARVIDAAGNTGSPVSQDVVVDTTAPTSDVSITAIADDTGAAGDFI
TADNTLVFSGTNTALGDGEKVQVSLDGGATWMDATQSDATHWSYDNTANTMADGTYTVEA
RVVDAAGNVGTNTDSKSLEVDTEAPTATITMDDTELTIGETTTVTITFSEPVVGFASGDD
VLIENGTLSEMTSSDGGKTWTGTFTPTANITDTTNVITLDDTYTDEAGNTGTTASANYSV
DTTPPPVIILDDGSKLINPVYVDGKYYYYWDKDGDGLGIENGNPDGDDMFTHDELDAIFM
YDVDGNQGDDYNGDTTDIYRYATLLGETGEEYNVALPTFGAETYGLQAATEIDNNPEGEI
NPTYDDLVAIWDAFEGGTNLTPENGTPPEWANGEYWSSTQFDETKHYSVDMTSSLVGTNG
EHETNYVAVEVIF
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgggtagagcaattacaatcattgtcaaagagggacaaaatgttatctcaagcaacagt
gtggcagaaggcagcggcagacctttggttatcaaagcgaaatcaggtcagtcatatgag
ctgaaagatatgaccaagggagtggctcccgatgaaatctatgtgatgagggacggcaaa
aacctcaaaattaaaatcggaaaaagagagaagagatccaacgacactgatgacactgca
gatatcatcatcgaagagtactttgatcatgattctagtctgatcggggctgcagagaac
ggtgagtactacaattacattccacagggagcaaatccggaagcatcttactacagtctc
ggaggagaaaccattgtagagagtgaaaccgattggcttcctattatccttggtgcactc
gctgtcggtgcgatcgctgctgctgcaggcggcggtggtggcggtggcggtggtgaagaa
gataccacgcctccggatcacctgacgatatctgtttataatgacgataaagaacctgat
gaaatcattatcgatacagagacaagcagtacagtgaacagcactgcgagtatccctgct
acgaatgacaatacaccgactatcaaagggaatacagaagcaggtgcagatgtgacgatt
acgtttaaaaacagcgcaggtcaggacatattaacaggaactgttcaagcagattacaat
gggaattatcaatttgtcccggatactgagcttcctgatgggcaatactatgttacagct
gttgcgaaggatgcggcgggtaatgcccttccggaatctacaggagtttttgagatagat
accgtagctccggatgctccgatccttgatctgactgacggaagtgacatttcaggtaca
gctgaaccgggaactctcattaccattactgatggaaacggaaacccgatcggcactacg
acaacaggtcaggacgggtacttcagctatacaccggatgaacctatccctgatgctaca
gtcatcgaagcgacagcaacagatgctgcgggcaatgaaagtacgccgggtacaaccacc
gtagatgcaagcattgccgatgcacctatcatctatgatgatgttgcacctgttatagga
gagatccacaataatgacacaacaaacgatacgcagcctgaaatctcaggagaggcagga
agtgtacctgaaaacgtgcttgttgagatctatgataacggtatcaaaataggtgaaacc
acgtcaaatcctgacggaagctggagctttactccgacttccgagtttgctaacggttca
gaccacagtatcacctataccaaaaatggcggtaccaaccacagccctgctgtcaatttc
acagtagatactacagctccggacgccgtttcagtggttgtcactgatgatgtgcttccg
atcattggagagatcgctgataacggcattacagatgacacgacaccgactattagcggt
actaccgaaccgggagcatccgttacgatcaaagatggagatacggaactcggtacggta
acagcagacagtaatggtgactatgaatttacaccgacgatacctctgaatgaaggtgaa
catactatcaccgtaacagcaacagatgcagcaggcaacagtgtcaacagtgacacaacc
aatttcacagtagatactacagctccggactctgtctccatggttatcacagacgatgtt
gcgccggtcattggggaaatcaccgaaaatgccattaccgatgatactacccctaccatc
agcggtaaaacagaaccagacgcaacggttatgatcaaagacggtattgttgtacttggt
accgtgacagcagatgccaacggagactatgaatttacaccgaccataccattagatgaa
ggttcacatgctattagcgtcactgcttccgatgcggctggcaacagtgtggagagtggc
acaatacattttaccatcgatacagatgcacctgactctgttgcagtagcgatcacaggt
atcgatgaggatactgctactgctggtgactttatcacctctgacaataccttggtcttc
agcggtacgaacggagcacttggtgacggtgaaaaggttcagatctcacttgacggtgga
gtgacatggacggatgttgaccagaacggtacgcaatggagctatgacaacacttccaac
accatggtagacggtacctacacggtagaggcacgtgtcatcgatgcagccggaaatgtc
ggaaacaccgacagccagagcgtcgtagttgataccacaccgcctgactctgttgcagta
gcgatcacaggtatcgatgaggatactgctactgctggtgactttatcacctctgacaat
accttggtcttcagcggtacgaacggagcacttggtgacggtgaaaaggttcagatctca
cttgacggtggagtgacatggacggatgcaacgcagagtgatgcgacgcattggagctat
gacaacagagccaacaccatggcagacggtacctacacggtagaggcacgtgtcatcgat
gcagccggaaatgtcggaaacaccgacagccagagcgtcgtagttgataccacaccgcct
gactctgttgcagtagcgatcacaggtatcgatgaggatactgctactgctggtgacttt
atcacctctgacaataccttggtcttcagcggtacgaacggagcacttggtgacggtgaa
aaggttcagatctcacttgacggtggagtgacatggacggatgcaacgcagagtgatgcg
acgcattggagctatgacaacagagccaacaccatgtcagacggtacctacacggtagag
gcacgtgtcatcgatgcagccggaaatgtcggaaacactgacagtcagagcgtcgtagtc
gatacgacaccgcctgactctgttgcagtagcgatcaccggtatcgatgaggatactgct
actgctggtgactttatcacctctgacaataccctcgtattcagcggtacgaacggagca
cttggtgacggtgagaaagtacagatctctcttgacggtggagtgacatggacggatgca
acgcagagtgatgcgacgcattggagctatgacaacactgccaacaccatggcagacggt
acctacacggtagaggcacgtgtcatcgatgcagccggaaatgtcggaaacactgacagt
cagagcgtcgtagtcgatacgacaccgcctgactctgttgcagtagcgatcaccggtatc
gatgaggatactgctactgctggtgactttatcacctctgacaataccttggtcttcagc
ggtacgaacgatccactcggtgacggtgagaaggtacagatctctcttgacggcggaaac
acatggatagataccactaaaactgatgcgacgcattggagctatgacaacactgccaac
accatgccagacggaacctacacggtagaagcacgtgtcgtcgatgcagccggcaatgtg
gggaacaccgacagtcagagcgtcgtagtcgatacagaggcacctgactctgttactgta
gcgatcacgggtatcaatgaggatactgctactgctggtgactttatcacctctgacaat
accttggtcttcagcggtacaaatacagccctcggtgacggtgaaaaggttcagatctcc
cttgacggcggaaacacatggacggataccactaaaactgatgcgacacattggagttat
gacaacactgccaacaccatgccagatggaacatatacggtagaggcacgtgtcatcgat
gcagcaggcaatacaggaagccctgtcagccaggatgtggtagttgatacgacagcgcct
acttctgatgtatctatcacagcaattgctgacgatacgggcgcagcaggtgactttatc
acggctgataataccctcgtattcagcggtacaaatacagcccttggtgatggtgaaaaa
gtccaggtctcccttgacggtggagctacatggatggatgcaacgcagagtgatgcaacg
cattggagttatgacaacactgccaacaccatggcagacggtacctacacggtagaggca
cgtgtcgtcgatgcagccggcaatgtgggtacaaatacagatagcaagagtttagaagtt
gatacagaggcaccgactgcgaccatcacaatggacgatacggaactcacgatcggtgag
acaacaaccgtcacgatcacattttctgaaccggttgtgggctttgccagcggtgatgat
gtgctcatagaaaacggaaccttatcggaaatgacaagttctgatggaggaaaaacctgg
acgggtacattcacaccgacggcgaacatcaccgatacaacaaatgtcatcacattggat
gatacatacactgatgaggcaggtaatacaggaaccaccgcttctgcaaactatagtgtc
gacaccactcctcctccggtcattatccttgatgatggcagcaaactgatcaacccggtt
tatgtagatggtaaatactactactattgggataaagacggagatggcctaggtatcgag
aacggcaatcctgatggtgatgatatgtttacccatgatgaactggatgctatttttatg
tatgatgttgatggtaatcagggagatgattataatggtgatacgactgacatctaccgt
tatgcaacgttactaggagagacaggggaagagtataatgtcgcactacctacatttgga
gctgagacatatggactacaggctgccaccgagattgacaataatcctgagggagagatc
aacccgacttatgatgaccttgtagcgatctgggatgcgtttgagggcggtacgaacctg
actccggaaaacggtacgcctccggaatgggcgaacggtgaatattggtcctcaacacaa
tttgatgaaaccaagcactactctgtggatatgacaagtagccttgtcggtacaaatgga
gaacacgagacaaactatgtagccgtagaggtgatattctaa
DBGET
integrated database retrieval system
