Sulfurovum mangrovi: LN246_11225
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Entry
LN246_11225 CDS
T09512
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smab
Sulfurovum mangrovi
Pathway
smab03030
DNA replication
smab03430
Mismatch repair
smab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LN246_11225
03430 Mismatch repair
LN246_11225
03440 Homologous recombination
LN246_11225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smab03032
]
LN246_11225
03400 DNA repair and recombination proteins [BR:
smab03400
]
LN246_11225
Enzymes [BR:
smab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LN246_11225
DNA replication proteins [BR:
smab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LN246_11225
DNA repair and recombination proteins [BR:
smab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LN246_11225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_14
AAA_19
AAA_30
ResIII
Mg_chelatase
AAA_5
RCF1-5-like_lid
AAA_assoc_2
AAA_16
AAA_24
DEAD
Glyco_tranf_2_5
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UFH58907
LinkDB
All DBs
Position
2195438..2197381
Genome browser
AA seq
647 aa
AA seq
DB search
MSLALARKYRPATFSDLIGQEAVSQTLSLALEGDRLSHAYLFSGLRGSGKTSTARIFAKA
LLCEKGTSAHPCGVCTHCVMASENRHMDIIEMDAASNRGIDDIKDLIEHTKYKPSSARYK
IFIIDEVHMLTNQAFNALLKTLEEPPDFVKFILATTDPLKLPATILSRTQHFRFKKIPQN
LVEGHLEHILNLENIGFEKEALEIIARTGAGSLRDSLTLLDQAIVYSKNYVDVTTVTNML
GIIEPSLLEQLIQDIIRKDQNKILAFLKMASNYEAEMILDELTLYLKAQLLSKSTALTPI
IIERFFRIIAESKGLLALGSDGEFILTLTLFKMMEALQIKEIDTMIQSLEKELQGVQITM
PAALAQREPEVVTITEADIGTPGSREEQAPTVTAHTEVRETQAEESQLQAEPVEQEIERY
ETPAAPNKGEKAEEIMPEVKEDTVMEQMEASPITEEPVSEAKPEEPLQEQSTVLDPNKKR
FETLVQKIFDRDFELGMCFETNIEFESFKEGTLTWSSTAQGEEKKQLITHWGVINMFVKE
LFGFDTKIVNIAKEAPQNREEESKKKSDEAITPSPEENSAPTQEEKECNASTSMLEDVEM
KSSCIAPEAGETEAAKEKDPSTLLDEPMIKAAIELFDPKKVRIKRKS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgtctttagccctcgcaagaaaataccgccctgctaccttcagtgatcttatcggtcag
gaagcagtgtcacaaaccctctctcttgcattggaaggggacagactctctcatgcctat
ctcttctctggactccgtggtagcggtaagacctccaccgcacgtatctttgcaaaagct
ttgctctgtgaaaaaggtacttcggctcacccgtgcggtgtctgtacgcactgtgtgatg
gcaagcgaaaaccgccatatggatatcatcgagatggatgctgcgagtaatcgcggtatc
gatgatatcaaagatcttatagagcatacgaaatataaaccgagttctgcacgttacaag
atcttcattatagatgaagtccatatgcttaccaaccaagcgttcaatgccctgcttaaa
acactcgaagagcctcctgactttgtcaagtttatcctggctaccacagaccccctcaaa
ctgcctgccaccatactctccagaacacagcacttcaggtttaaaaagattcctcaaaac
ctggtagaggggcatctcgaacatatcctgaatcttgagaatatcgggtttgaaaaagag
gctttggagatcatcgcccgtaccggtgcaggaagtttgagggactctcttaccctgctt
gaccaggcgattgtctactccaaaaactatgtagatgtgactaccgtaaccaatatgctc
ggtatcattgaaccaagcctgctcgaacaattgatccaggatatcatccgtaaagatcag
aacaagatcttagcgttcctaaagatggcatccaattatgaagcagagatgatcctggat
gagttaaccctctacctgaaggcacaactgctctccaagagcactgccctgactccgatc
attatagagcgtttcttcaggattattgcagagtccaaaggactgcttgcactgggaagt
gacggtgagtttatcctgaccttgacgctttttaaaatgatggaagctctgcagatcaaa
gagatcgatacgatgatacagtcacttgagaaagagctgcagggtgtacagatcactatg
cctgctgctctagcgcaaagagagcctgaagtggttacgatcactgaggccgacattggt
accccaggcagcagagaagaacaagcacctacagtaacagcgcatacagaggttagagaa
acacaagcggaagaatcccagcttcaagcagagccggttgagcaggagatagaaagatat
gaaactcccgcagcaccaaataaaggtgaaaaagcagaggagataatgcctgaagttaaa
gaagatacagtgatggagcagatggaagcatctcctataacagaggaaccggtatctgag
gccaagcctgaagagcctctgcaagaacaaagcacggttctggatcctaacaaaaaacgc
tttgagacactggtccaaaaaatctttgacagggattttgaactgggtatgtgtttcgag
accaatatcgagtttgaaagtttcaaagagggtacacttacctggagctccacagcacag
ggagaggagaagaaacaactgatcacccattggggagtgatcaatatgttcgtcaaagag
cttttcggatttgataccaaaatcgtcaatattgcaaaagaagcacctcagaacagagaa
gaggaatcaaaaaaaaaatctgatgaagccataacgccatcccccgaagagaacagtgct
ccgacacaggaagagaaagagtgcaacgcctcaacctctatgctcgaagatgtggagatg
aaaagctcttgtatcgcaccggaagcaggtgaaaccgaagctgccaaagagaaagacccc
tctaccctgcttgatgagccgatgataaaggctgcaattgaactctttgatcctaaaaaa
gtaagaatcaaacgaaagagttaa
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