Sulfurovum mangrovi: LN246_11735
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Entry
LN246_11735 CDS
T09512
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smab
Sulfurovum mangrovi
Pathway
smab03030
DNA replication
smab03430
Mismatch repair
smab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LN246_11735
03430 Mismatch repair
LN246_11735
03440 Homologous recombination
LN246_11735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smab03032
]
LN246_11735
03400 DNA repair and recombination proteins [BR:
smab03400
]
LN246_11735
Enzymes [BR:
smab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LN246_11735
DNA replication proteins [BR:
smab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LN246_11735
DNA repair and recombination proteins [BR:
smab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LN246_11735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UFH59003
LinkDB
All DBs
Position
complement(2294140..2294943)
Genome browser
AA seq
267 aa
AA seq
DB search
MQKVFDELTIAFRKHGGLLKEEQYKHIAVKHTTLLEDADTIYILLQASGYPISQREDNSY
QLDTYFTPYYEQRYCVVDIETNGSKPGDSQVIEIGAVMVKNGQIIDRFETFVECAFLPEY
ITKITGIEPQDLIGAPSRKEALTRLRHFMGDAVFVAHNASFDYSFLDASFERFGLGNMGN
PKLCSIDLARRTFESERYGLAYLIDFLGIETATHHRAYSDAYCAYQVMRKSFETVPEYVR
SADDLIVFSTSSRKERSRKRERGAGNS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaggtatttgatgagctgaccattgcatttcgtaagcatggcggtctgttgaaa
gaagagcagtataagcatattgccgttaagcatacaacacttctggaggatgccgatacg
atctatatccttctgcaggcatcgggatatcctatctcacaaagggaagacaatagttat
caactggatacctattttactccctattatgaacaacgttactgcgtggtcgatatagag
acaaatggcagtaaaccgggagactcccaggtcattgagatcggtgcagtgatggtaaaa
aacggtcagatcattgatcgtttcgagacttttgtagagtgtgctttcctgccggagtat
atcaccaagatcaccggtatagaacctcaggacctgatcggtgcacccagtagaaaagag
gcactgaccagattgcgtcactttatgggggatgcggtctttgtggcacacaatgccagt
ttcgattatagttttttggatgcctcttttgaacgtttcggccttggtaacatgggcaat
ccgaaactctgttccattgatctcgcgagacgtacctttgagagtgagcgttacggcctg
gcctatctgatagattttttgggtatcgagacagcaacccaccacagggcctatagtgat
gcctactgtgcttaccaggtgatgagaaagagttttgaaaccgtaccggagtatgtacga
agtgcagatgatcttatcgtgttttcgacctccagcaggaaggagagaagccgaaagagg
gagcggggagcagggaacagctag
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