Sulfurovum mangrovi: LN246_13105
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Entry
LN246_13105 CDS
T09512
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
smab
Sulfurovum mangrovi
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smab01002
]
LN246_13105
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smab01011
]
LN246_13105
Peptidases and inhibitors [BR:
smab01002
]
Cysteine peptidases
Family C82
LN246_13105
Peptidoglycan biosynthesis and degradation proteins [BR:
smab01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LN246_13105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
zf-C2H2_15
Motif
Other DBs
NCBI-ProteinID:
UFH59256
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Position
2572524..2574230
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AA seq
568 aa
AA seq
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MKLKKLLWVGLFIHTLAYGQISLGEIQSHLKTTIQTHIKGQNKEIIEALYARSGNQPLWL
GDKNEKKRNALIRALKNPLFNYKDKPFDQPSIARLYYMLDNNTVSPAQKAQVYARLDLML
TNSFVRLVRFIVQGDVDWNLVQKKLAALKESDDIHAVWEMQIKPFPEENKLIAAVQSGNI
YGYLSSLIPMERRYRRLVRLLKDYRTMEKFPKIPYTNEPRKMGNRRNKSIEEIKKRLQIT
GDYPKNAPINTTFDKTLQQAVISYQKRYNLKVSGEVDKVMTYYLNQPVKTHIQSIITNLD
KTKLYPKTFENEYVEVNIPDFQLRYYKNQRLMMKMGAVVGRIDRPTPLFDDKIEYMVLNP
TWTITDNLVKRDLIPVLRENPSYLIDNNIKAYSGRQEVDVTYEMIAPYKNSTVRVPYRFV
QQPGPSNALGRVKFMFPNKYSVYLHDTDNKSLLSRRYKIYSSGCMRVQKPFELMNTLLAH
TRGRYTQEKIDEILESNEPTTIMLSSHIPVHIIYFTVFEEDGKAHFKNDIYLYDQIISES
IIGRSKETFTVPQKRVISIKKQSRGVSN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgaaaaaactactatgggttggactcttcatccatacattggcttatgggcag
ataagtcttggtgagatccaatcacacttgaaaacaacaatacagacgcatatcaaaggt
caaaataaagagatcattgaagcgctttatgcgcgttccggaaatcaaccgttatggctt
ggagataaaaatgaaaaaaagagaaacgcactgatccgggcacttaaaaacccgttgttc
aactataaagataaaccctttgatcagccctccattgccagactctactatatgcttgat
aacaataccgtttcccctgcccaaaaagcacaagtctatgcacgactggatctcatgttg
accaactcctttgtccggcttgtccgtttcatcgtacagggtgacgtagactggaacctg
gtacaaaaaaaactcgcagccctcaaagagagtgatgacatccatgcggtatgggagatg
cagatcaaacccttccctgaggaaaacaaactgattgctgcagttcagagcggcaatatc
tatggctatctctcctcactgattccgatggagagacgttacaggagattggtacggtta
ctcaaagactaccgcaccatggaaaaatttcccaaaatcccttataccaacgaaccacgt
aaaatgggaaaccgcagaaacaaaagtatagaagagatcaaaaaacgtctgcagatcaca
ggggattatccgaaaaatgcaccgataaacacaacctttgacaaaacactccaacaagca
gtgatctcctatcaaaaacgttataacctgaaagtaagcggtgaggtggataaggtgatg
acctactatctcaatcagcctgtaaaaacacatatccaaagtattattaccaacctggat
aagaccaaactctaccccaaaacatttgaaaatgaatatgtagaggtgaatatccctgat
tttcaattacgttactataaaaaccaacgcttaatgatgaaaatgggggcggtggtagga
cgtatcgaccgcccgacaccgctttttgatgataaaatagagtatatggtactcaaccct
acctggaccatcacagacaatctcgtcaaacgtgacctgatccctgtactcagagagaac
ccttcctatcttattgacaacaacatcaaagcatacagcggccgtcaagaggttgatgtg
acctatgagatgatcgcaccgtataaaaacagtaccgtgagagtaccataccgttttgtt
cagcagcccggtccttccaatgctctgggacgtgtcaagtttatgttcccgaacaaatac
tcggtctatctccatgataccgacaacaaatccctgctttcaagacgttataaaatctac
agttccggatgtatgcgtgtacaaaaaccttttgaactgatgaatacactcttagcacat
acaagaggacgttatacacaagagaagattgacgaaatacttgaaagcaacgaaccgacc
acgatcatgctctcttcacatatccctgtgcatatcatctacttcactgtgtttgaagaa
gatggaaaggcacacttcaaaaatgatatctatctctatgatcagattatcagtgaatcg
attatcggcagatccaaagagacattcacggttcctcaaaaacgtgtcatctcgatcaag
aaacaatcccgtggggtttcaaactaa
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