Serratia marcescens subsp. marcescens Db11: SMDB11_0013
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Entry
SMDB11_0013 CDS
T03985
Symbol
nhaR
Name
(GenBank) DNA-binding transcriptional activator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_0013 (nhaR)
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SMDB11_0013 (nhaR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CDG10612
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Position
16608..17507
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AA seq
299 aa
AA seq
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MRMSHINFNHLYYFWQVCKAGSVVGAAEALFLTPQTITGQIKALEERLDGKLFKRQGRGL
VPSELGQLVFRYADKMFMLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSQVLETAVVV
DNEQIHLRCFESTHEMLLEQLSQHKLDMILSDCPVDSSQQEGLFSLKLGECGISFFCRQP
APELPFPACLEQRKLLIPGRRSMLGRKLLNWFNTQGIQVEILGEFDDAALMKAFGMYHNA
IFVAPTLYAQDTYNDDNVVEIGRIDSVQEEYYIIFAERMIQHPAVQRVCNKDFSALFSC
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgaggatgtcgcatatcaactttaatcacctttactatttctggcaggtctgcaaggcc
ggttccgtggtcggcgccgctgaagcgttgtttctgacgccgcagaccatcaccggccag
atcaaggcgctggaagagcggttggacggcaagctgttcaaacgccaggggcgcgggttg
gtgccttcggagctggggcagttggtgttccgctatgctgacaagatgtttatgctcagc
caggaaatgctggatatcgtcaactatcgcaaagagtcgaatctgctgttcgacgtcggc
gtggcggacgcgctgtcgaagcgcctggtcagccaggtgttggaaacggcggtggtggtg
gacaacgaacagatccacctgcgttgttttgaatcgacgcacgagatgctgctggagcag
ctcagccagcacaagctggatatgatcctgtcggattgcccggtggactccagccagcag
gaagggctgttctcgctgaagctgggcgagtgcggcatcagcttcttctgtcgccagccg
gcgccggagttgccgttcccggcctgcctggagcagcgcaagttgctgatccccggccgc
cgttcgatgctggggcgcaaactgctcaactggttcaatacgcagggcatccaggtggag
attctgggcgagttcgacgatgcggcgctgatgaaggctttcggcatgtaccacaacgcg
atcttcgtggcgccgacgctgtatgcgcaggatacctacaacgatgataacgtggtggag
attggacgtatagacagcgtgcaggaggagtattacatcatcttcgccgagcgcatgatc
cagcatccggcggtgcagcgcgtctgcaacaaagacttctcggcgctgttttcctgctag
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