Serratia marcescens subsp. marcescens Db11: SMDB11_0026
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Entry
SMDB11_0026 CDS
T03985
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00220
Arginine biosynthesis
smac00240
Pyrimidine metabolism
smac00250
Alanine, aspartate and glutamate metabolism
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01240
Biosynthesis of cofactors
Module
smac_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SMDB11_0026 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SMDB11_0026 (carB)
00220 Arginine biosynthesis
SMDB11_0026 (carB)
Enzymes [BR:
smac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SMDB11_0026 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
CDG10625
UniProt:
A0ABC9ID72
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All DBs
Position
31269..34493
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGSDRIWYIADAFRAGLSVDGVFNLTNVDRWFLVQIEELVRLEEQVAEAG
INGLDKDFLRTLKRKGFADARLAKLAGVAESEIRKLRHSHGLHPVYKRVDTCAAEFATDT
AYMYSTYEEECESNPTNDRPKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVP
IIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVTAIEQAVEKAAGIGYPLVVRPSYVL
GGRAMEIVYDETDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRRQVEKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLVEQGVTEEIIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSNSGMKKQGRALLSVREGDKARVVDL
AASLLKQGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALKADPTEQVTSVQEMHARIGK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagcatcctgatcctcggcgcgggtccgatcgttatc
ggccaggcgtgtgagttcgactactcgggcgcccaggcgtgtaaagcgctgcgcgaagag
ggctaccgcgtcattctggtcaactccaacccggcgaccatcatgaccgacccggagatg
gccgacgcgacctacattgagccgatccactgggaagtggtgcgcaagatcattgaaaaa
gagcgcccggatgcggtgctgccgaccatgggcggccagacggcgctgaactgcgcgctg
gagctggagcgtcagggcgtgctggccgagttcggcgtcaccatgatcggcgcgaccgcc
gatgccatcgacaaggccgaagaccgccgccgtttcgacgtggcgatgaagaaaatcggt
ttggataccgcgcgttccggcatcgcgcacaccatggaagaagcgctggcggtagccgct
gacgtcggcttcccgtgcattatccgtccttcctttactatgggcggcaccggcggcggc
atcgcctacaaccgcgaagagttcgaagagatctgcgaacgcggtctggacctgtcgccg
accaacgagctgctgatcgacgaatcgctgatcggttggaaagagtacgagatggaagtg
gtgcgtgataagaacgacaactgcatcatcgtttgctccatcgaaaacttcgacgccatg
ggcatccacaccggcgactcgatcaccgttgcgccggcccagaccctgaccgacaaggaa
taccaaatcatgcgcaacgcctcgatggcggtgctgcgtgagatcggcgttgaaaccggc
ggctccaacgtgcagttctcggttaacccgaaaaccggccgcctgatcgtcatcgagatg
aacccgcgcgtgtcgcgctcttcggcgctggcgtcgaaagccactggcttcccgatcgcc
aagatcgccgccaaactggcggtgggctataccctcgatgagctgatgaacgacatcacc
ggcggccgcactccggcgtcgttcgagccgtccatcgactacgtcgtgaccaagatcccg
cgcttcaacttcgagaagttcgccggcgctaacgatcgcctgactacccagatgaagtcg
gtcggcgaagtgatggccatcggccgcacccagcaggagtcgctgcagaaagcgctgcgc
ggtctggaagtgggcgccaccggcttcgatccgaaagtgagcctggacgatccggaagcg
ctgaccaaaatccgccgcgagctgaaagacgccggttccgaccgcatctggtacatcgcc
gacgccttccgcgccggtctgtcggtcgacggcgtcttcaacctgaccaacgtcgatcgc
tggttcctggtgcagattgaagagctggtgcgcctggaagagcaggtagccgaagcgggc
atcaacggcctggacaaagacttcctgcgcacgttgaagcgcaagggcttcgccgatgcg
cgtctggccaagctagccggtgtcgccgagagcgaaattcgcaagctgcgtcacagccac
ggtctgcatccggtgtacaagcgcgtggatacctgcgcggcggaattcgccaccgacacc
gcctacatgtactccacctatgaagaagagtgcgagtccaacccgaccaacgaccggccg
aaagtgatggtgttaggcggcgggccgaaccgtatcggccaaggcatcgagttcgactac
tgctgcgtgcacgcctctctggcgctgcgcgaagacggttacgagaccatcatggtcaac
tgtaacccggaaaccgtctccaccgactacgacacctcggaccgcctgtactttgagccg
gtgaccctggaagacgtgctggaaatcgtgcgcatcgagaaaccgaaaggcgttatcgta
cagtacggcggccagaccccgctgaagctggcgcgtgagctggaagccgcaggcgtgccg
atcatcggcaccagcccggacgccatcgaccgtgccgaagaccgcgaacgcttccagcag
gcggtcaaccgcctgggcctgaagcagccggccaacgccaccgttaccgccatcgagcag
gcggtcgagaaggcggcgggcatcggctatccgctggtagtgcgtccttcctacgtgctg
ggcggccgggcgatggaaatcgtctatgacgaaaccgacctgcgccgttatttccagacc
gcggtcagcgtgtccaacgatgcgccggtgttgctggaccgcttcctggacgacgcggtg
gaagtggacgtcgatgctatctgcgacggcgagcgcgtgctgattggcggcatcatggag
cacatcgagcaggcgggcgtgcactccggcgactccgcgtgctcactgccggcgtacacc
ctgagccaggaaattcaggacgtgatgcgtcgccaggtggaaaaactggcgttcgagctg
caggtgcgcggtctgatgaacgtgcagttcgcggtgaaagacaacgaagtctacctgatt
gaagtcaacccgcgcgccgcgcgtaccgtgccgttcgtgtccaaagcgaccggcgtgccg
ctggccaaagtggccgcgcgcgtgatggcgggcaaaacgctggttgagcagggcgtgacc
gaagaaattatcccgccgtactactcggtgaaagaagtggtgctgccgttcaacaaattc
ccgggcgtcgacccgattctggggccggaaatgcgctctaccggggaagtgatgggcgta
ggccgcaccttcgcggaagccttctccaaagcgatgctgggcagcaactcgggcatgaag
aagcagggccgtgcgctgctgtcggtgcgcgaaggcgataaagcccgcgtggtcgatttg
gccgccagcctgctgaagcagggcttcgagttggatgccacccacggcaccgcggtggtg
ctgggcgaagcgggcatcaacccgcgtctggtcaacaaggtgcacgaagggcgtccgcac
attcaggaccgtatcaagaacggcgagtacacctacatcgtcaacaccacggcaggccgc
caggcgattgaggactccaagctgattcgccgcagcgccctgcagtacaaggtgcactac
gacaccacgctgaacggcggctttgccaccgcgatggcgctgaaagcggatccgaccgag
caggtgacttcggtgcaggaaatgcacgcgcgtatcggcaagtaa
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