Serratia marcescens subsp. marcescens Db11: SMDB11_0170
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Entry
SMDB11_0170 CDS
T03985
Symbol
ffh
Name
(GenBank) signal recognition particle component with 4.5S RNA ffs
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac02024
Quorum sensing
smac03060
Protein export
smac03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SMDB11_0170 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SMDB11_0170 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMDB11_0170 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smac02044
]
SMDB11_0170 (ffh)
Enzymes [BR:
smac01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SMDB11_0170 (ffh)
Secretion system [BR:
smac02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SMDB11_0170 (ffh)
Eukaryotic Sec-SRP protein
SMDB11_0170 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_31
AAA_30
AAA_24
Helicase_RecD
KTI12
AAA_33
YqeC
APS_kinase
Fe-ADH_2
AAA_14
AAA_19
ATP_bind_1
AAA_16
TsaE
Motif
Other DBs
NCBI-ProteinID:
CDG10761
UniProt:
A0ABC9IDJ3
LinkDB
All DBs
Position
191260..192621
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AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKESAV
GHEVNKSLTPGQEFVKIVKGELIAAMGEVNTELNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAEGVGIDFFPSDVKEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFYPDRVASRILGMGDV
LSLIEDIESKVDREQAEKLANKLKKGDGFDLTDFLEQLKQMRNMGGMANMLSKLPGAGQL
PDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAMGAGMQVQDVNRLLKQF
DEMQRMMKKMKKGGMAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatttaaccgatcgattgtcgcgcacgttgcgcaatatcagcggccgcggg
cggctgaccgaagagaatatcaaggaaaccctgcgtgaagtgcgtatggcattgctggaa
gcggacgttgcgctgccggtggtgcgcgacttcatcaaccgtgtcaaagagagcgcggtt
ggtcatgaagtcaacaagagcctgacgccggggcaggagttcgtcaagatcgtcaagggc
gagctgatcgccgcgatgggcgaagtcaacaccgagctgaatctggcggcccagccgccg
gcggtggtgctgatggcgggcctgcagggcgccggtaaaaccaccagcgtcggtaagctc
ggcaagttcctgaaagaaaaacagaagaagaaagtgttggtggtttccgcggacgtttat
cgcccagcggcgatcaaacagctggaaacgctggcggaaggcgtcggcatcgatttcttc
ccgtctgacgtcaaagaaaaaccgatcgacatcgtcaatcgcgcgctgcaacaggccaag
ctgaaattctacgacgtactgatcgtcgataccgccggccgtctgcacgttgacgaagcg
atgatggacgagatcaaacaggtgcacgcggcgatcaagccggtggaaaccctgttcgtg
gtcgacgccatgaccggccaggacgccgccaataccgccaaggcgtttaacgaagcgctg
ccgctgaccggcgtggtgctgaccaaggtcgacggcgatgcgcgcggcggtgcggcgttg
tccatccgccacatcaccggcaagccgatcaagttcctcggcgtcggcgagaagaccgaa
gcgctggagccgttctatccggatcgcgtggcgtcacgcatcctgggcatgggcgacgtg
ctgtcgctgatcgaagatatcgaaagcaaggtcgaccgcgagcaggcggagaaactggcc
aacaagctgaagaagggcgacggtttcgatctgaccgacttcctggagcagctcaagcag
atgcgcaacatgggcggtatggccaacatgttgagcaagctgccgggcgcgggccaactg
ccggacaacgtcaaatcgcagatggacgacaaagtgctggtgcgcatggaggcgatcatc
aactcgatgacgctgaaagagcgcgccaaacctgaaatcatcaagggctcgcgcaagcgc
cgcatcgcgatgggggccggcatgcaggtgcaggacgtcaaccgcttgctgaagcagttc
gacgaaatgcagcgtatgatgaagaagatgaagaaaggcggtatggcgaagatgatgcgc
ggcatgaaaggtatgatgccaccgggcttcccaggccgctga
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