Serratia marcescens subsp. marcescens Db11: SMDB11_0299
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Entry
SMDB11_0299 CDS
T03985
Symbol
sbcC
Name
(GenBank) exonuclease, dsDNA, ATP-dependent
KO
K03546
DNA repair protein SbcC/Rad50
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_0299 (sbcC)
DNA repair and recombination proteins [BR:
smac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SMDB11_0299 (sbcC)
Archaeal homologous recombinant proteins
SMDB11_0299 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_21
cobW
AAA_15
NTPase_1
TsaE
GTP_EFTU
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CDG10890
LinkDB
All DBs
Position
complement(318941..322192)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLELTATITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDGLHQRASGIELLNDEQRQSLTEQLTALSAQEIALGEQTQR
QQQALSWLQQWQRLRQQQGEGQRRLETAQREQAEAAPQLQQLALSEPAEKLRPLRGERDR
CRAELQTIQQQAAQLTQQQEQHSAQLAPLQQAVEKARLAQQTHAEYMQQQQQLIDEQVAP
LDHQIAQLQSTQAERRQAADATTQQCAQQQTTLEQLTAQRSQLTAQGALHQQQLNALNEA
LAVQQQQQQALEAQTPLAPLRQRLSALADLRPTRQQLFTLASLNRQTRERLARQQAEHAE
RQTQLAGLQQQLESARQQFKQHKAQLQEVEQIHELEKRIVSLEAERALLQSGAPCPLCGS
TSHPAVEQYQAVQPSATEQRLVEMRTLAEKLQTQGTELRTRCEGLQEQQQRQQQTIAQDE
QQLAAQQQQWQQLSAPLAFDFTLAESERLSAWLSGCDDEERRGQHALQQHEQAAQAVQQA
KDALAALQTQQQQAQQQLALLEERFTLLQKTYADSLQQQQDLQQRWQEGEKTLAERRAQR
LALFGEQRVAEVREQLRAKQTACEQASLQAAEQWQKAQELRERLTGQQAGLQQQHTQMQE
RLQQAQQQWQQALADSEFADETAFTAALLDDTLRRELQQRREQLQQRQVEAAALLTQATQ
TLEQHRLSRPEGVDEANTDLDALTQSLAELAQQLKTLQLRQGELRNQLESDAARRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANQQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcagcctgcggttaaaaaacctcaactcgctgcagggcgaatggaaaatt
gacttcaccgccgagccgttcgccagcaacggcctgttcgccattaccggcccgaccggc
gcgggcaaaaccaccctgctggacgccatttgcctggcgctgtaccaccagacgccgcgc
ctcaacgtcacgccgagccagaatgaactgatgacccgccacaccgccgaatcgctggcg
gaggtcgaattcgaggtcaagggcgtcggctatcgcgccttctggagccagcgccgcgcc
aagaatgcgccggacggcaatctgcaggcgccgaaggtcgaattggcgcgccgcgaggac
ggcaagatcctggcggacaaggtgcgcgacaagctggagcttaccgcaaccatcaccggg
ctggactttggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgccttc
ctcaatgccgatgccaacgatcgcgccgaactgctggaagagctgaccggcaccgaaatc
tatgggcgactgtccgaacaggtgttcgagtcgcacaagcaggccaaaaccgacctggat
gggttacaccaacgcgccagcggcatcgaactgctgaacgacgagcagcgccagtctctg
accgaacagctgacggcgctgagcgcgcaggaaatcgccctcggcgagcaaacccagcga
cagcaacaggcgctgagctggctgcagcaatggcaacgcctccggcaacagcaaggcgag
ggtcaacggcggctggaaaccgcccagcgcgagcaggcagaggccgccccgcagctgcag
cagctggcgctcagcgaaccggccgagaaattgcggccgctgcgcggcgaacgcgatcgc
tgccgcgccgaactgcagacgatacaacagcaggcagcccagctgacgcagcaacaggaa
cagcactcggcgcagctggcgccgctgcagcaggcggtggaaaaagcccgcctggcgcag
caaacccatgccgagtatatgcagcagcagcaacagctgatcgatgagcaggtcgctccg
ctcgaccaccaaatagcccaactgcagtcgacacaggccgagcgacgacaggccgccgat
gccaccacgcagcagtgcgcccagcagcaaactacgctggagcagctcaccgctcagcgc
agccagctgacggcacagggcgcactacatcagcagcagttgaacgcgctgaacgaagcg
ctggccgttcaacaacagcagcaacaggcgctggaggcgcaaacgccgttggccccgctg
cgccaacgcctgagcgccctggcggatctgcgcccaacacgccagcagctgtttactctg
gcgtcccttaaccgtcagacccgcgagcgtctggctaggcaacaggcggagcacgccgag
cggcaaacgcagctcgccgggctgcaacagcagttggagagcgcgcgtcagcaattcaaa
cagcacaaggcgcagctgcaggaagtggagcagatccacgaactggaaaaacgcatcgtc
agtctggaagcggagcgcgccctgctgcaaagcggtgccccctgcccactgtgcggttcc
accagccatccagcagtagagcagtatcaggctgtacagccttcggccacggaacagcgt
ttggttgagatgcgtactctcgccgagaaactgcaaacccagggcaccgagttgcgtacc
cgctgcgaaggcctgcaggaacagcaacaacgccagcagcaaaccatcgcgcaggatgaa
cagcagttggctgcccaacagcagcagtggcagcagctcagcgcaccgctggcgttcgac
tttacgctggcggagagcgagcgactcagcgcctggctgagcggttgcgacgatgaagag
cggcgcgggcagcacgcgctgcagcagcatgaacaggcggcgcaggcagtacaacaggca
aaagacgcgctcgccgctctgcaaacgcagcagcagcaggcgcagcaacagctggcgctg
ctcgaagagcgctttacgctgctgcagaaaacctatgccgacagcctgcaacagcagcaa
gacctgcaacaacgctggcaggaaggcgagaaaactctcgcagagcggcgcgcgcagcgg
ctggcgctgttcggcgaacagcgggtcgccgaggtgcgggaacagctgcgcgccaaacaa
accgcctgtgaacaggccagcttacaggccgccgagcagtggcaaaaggcgcaggaactg
cgcgagcgcctgaccggccagcaggccgggttacaacaacagcacacccagatgcaggag
cggctgcagcaggcgcagcagcagtggcagcaggcgctggccgacagcgaattcgctgat
gaaaccgccttcaccgccgcgctgctggacgacacactgcgccgcgaattgcagcagcgt
agagagcaactgcaacagcggcaggtagaggccgcggccctgctgacgcaggcgacgcaa
acgctggagcagcatcggctgagccgccctgagggggtggatgaagccaacacggatctc
gacgcgctcacccaatcgctggccgagttggcacagcagttgaaaacgttgcagctgcgc
cagggtgaactgcgcaaccagttggaaagcgacgccgcccgtcgccttaatcagcaggcg
ctgttcgagcagatcgcccgcagtcagcaagactacgacgactggagctacctcaaccag
ctgatcggctcgaaagaaggcgacaagttccgccgcttcgctcaggggttaacgctcgat
catctggtctatctggctaaccagcaactcggccggctgcatgggcgctacctgcttcag
cgcaaaaccagcgatgcgctggagctgcaggtggtggacacctggcaggcggacgcgctg
cgcgatacccgcaccctgtccggcggtgagagcttcctggtcagcctggcgctggcgctg
gcgttgtccgatctggtcagccacaaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctagacgccgaaaccctcgataccgcgctggacgcgctggacagcctgaat
gcctccggcaaaaccatcggcgtgatcagccacgtcgaggcgatgaaagaacgtattccg
gtgcagatcaaggtgaaaaaggtcaacgggctcggcgtcagccggctggaggcgcatttc
aggctggaatga
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integrated database retrieval system
