Serratia marcescens subsp. marcescens Db11: SMDB11_0346
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Entry
SMDB11_0346 CDS
T03985
Symbol
ppiD
Name
(GenBank) peptidyl-prolyl cis-trans isomerase D
KO
K03770
peptidyl-prolyl cis-trans isomerase D [EC:
5.2.1.8
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smac03110
]
SMDB11_0346 (ppiD)
Enzymes [BR:
smac01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
SMDB11_0346 (ppiD)
Chaperones and folding catalysts [BR:
smac03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
SMDB11_0346 (ppiD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SurA_N_3
SurA_N_2
Rotamase_2
Rotamase_3
Rotamase
SurA_N
SLIDE
DUF7744
Trigger_C
Motif
Other DBs
NCBI-ProteinID:
CDG10937
UniProt:
A0ABC9IE19
LinkDB
All DBs
Position
372625..374508
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AA seq
627 aa
AA seq
DB search
MMDNLRAAANHVVLKIILALIILSFVLTGVGNYLIGGSGDYAAKVNGQTIERAQLEQAFQ
SERSRMQQQLGDQFSALAGNEGYMQQMRRQVLSQLIDNMLLDQYAKKLGLTVSDDQIKDA
IRKAPYFQTNGQFDNAKYLDLIGRMGYTADNFAQSMRQQLVNQQVIQAFGDSGFVLPSES
QAMAALVLQERDVRLATIDLKALQAKQSAGDDELKAYYDQNKNSFIAPEQVKVSYIPLDA
ASMQDKVKVSEEDISAYYDQHKSSYGQPERKNYSVIQLKSEAEANAALDELKKGADFATL
AKEKSTDIISRRTGGELGWLEPETTADELKQANLTEKGQLSGVVKSSVGFLIVRLNDIEP
EKLKPLSEVHDAIAKQVQQEKAVDAYYALQQKVSEAATSDNESLASAEEAAGVKAAQSDW
FTRDNIPAALNFKPVVQAIFDGSLIGENGAPGSNSDVITVDGDRAFVVRVSGHKPEGIEP
FDQVKDRVADLVKRNKALQAAKLQGEKLLVELKQGKGDEAMKAAGLSFGAVQKMARAPED
SQLVESVFALPHPQDGKPVYGMSQDRQDNVVLIALDAVKPGTLPEDEMKTFVGKMEEGAT
GVSFDSLLASLRKEAKIKMGAAEQQPQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaatttacgcgcggctgccaatcacgtcgtgctcaaaatcatcctggccctg
atcatcctgtcattcgttctgaccggggtgggtaactacctgatcggcggctccggcgat
tatgctgcgaaagtaaatggtcagacgatcgaacgcgctcagctggaacaggctttccaa
agcgagcgtagccgcatgcagcagcaactgggtgaccagttctccgcgctggccggcaac
gaaggctacatgcagcagatgcgccgtcaggtgttgtcccagttgatcgacaacatgctg
ctcgaccagtacgccaagaaactgggcctgacggtcagcgacgatcagatcaaggacgcc
atccgcaaggcgccttacttccagaccaacggccagtttgataacgccaaatacctcgac
ctgatcggccgcatgggctacaccgccgacaatttcgcgcagtcgatgcgtcagcaattg
gtcaatcagcaggtgatccaggccttcggcgattccggctttgtgctgccgtccgaatcg
caagccatggcggcgttggtgctgcaggagcgcgacgtgcgcctggcgaccatcgatttg
aaagcgctgcaggcgaaacagagcgccggcgacgacgaactgaaggcgtattacgatcag
aataaaaacagcttcatcgctccggagcaggtgaaggtgagctatatcccgctggacgcc
gcgtccatgcaggacaaggtgaaagtgagcgaagaggacatcagcgcttactatgaccag
cacaagagcagctatggccagccggagcgtaaaaactacagcgtgatccagctgaaatcc
gaggcggaagccaacgcggcgctggacgagctgaagaagggtgccgatttcgccaccctg
gcgaaagagaaatccaccgacatcatctcacgccgtaccggcggtgagctgggttggctg
gagccggaaaccaccgccgacgagctgaaacaggctaacctgaccgagaaagggcagctg
tccggcgtggtgaaatcctctgtcggcttcctgatcgtgcgtttgaacgacatcgaacct
gagaaactgaaaccgctgagcgaagtgcatgatgctatcgccaagcaggtgcagcaggag
aaagcggtagacgcgtattacgcgctgcagcagaaggtgagcgaagcggcgaccagcgac
aacgaatcactggcctcggctgaagaagcggccggcgtgaaagcggcgcaaagcgactgg
ttcacccgcgacaacattcccgccgcgctgaacttcaagccggtcgtgcaggcgatcttc
gacggctcgctgatcggcgagaacggcgcgccgggcagcaactctgacgttatcaccgta
gacggcgaccgcgccttcgtggtgcgcgtgagtggccacaagccggaaggcatcgagccg
ttcgaccaggtcaaagaccgcgtggcagatctggtgaagcgcaacaaggcgctgcaggca
gcgaagctgcagggcgagaagctgctggttgagctgaagcagggcaagggcgacgaggcg
atgaaagccgccggcctgagctttggcgccgtgcagaagatggcgcgcgcgccggaagac
agccagctggtggagagcgtgttcgcgctgccgcacccgcaggatggcaaaccggtgtac
ggcatgtcgcaggatcgccaggacaacgtggtgctgatcgcactcgatgcggtgaagcca
ggcacgctgccggaagacgaaatgaaaaccttcgtcggcaagatggaagagggcgcgacc
ggcgtttccttcgattcgctgctggcgagcctgcgtaaagaagccaaaatcaaaatgggc
gccgctgagcaacagccgcagtaa
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