Serratia marcescens subsp. marcescens Db11: SMDB11_0378
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Entry
SMDB11_0378 CDS
T03985
Symbol
dnaX
Name
(GenBank) DNA polymerase III/DNA elongation factor III, tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac03030
DNA replication
smac03430
Mismatch repair
smac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMDB11_0378 (dnaX)
03430 Mismatch repair
SMDB11_0378 (dnaX)
03440 Homologous recombination
SMDB11_0378 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smac03032
]
SMDB11_0378 (dnaX)
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_0378 (dnaX)
Enzymes [BR:
smac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMDB11_0378 (dnaX)
DNA replication proteins [BR:
smac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMDB11_0378 (dnaX)
DNA repair and recombination proteins [BR:
smac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMDB11_0378 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_14
AAA_16
EAL
ResIII
AAA_2
AAA_assoc_2
TsaE
nSTAND3
AAA_7
AAA_24
Mg_chelatase
SKI
PIF1
Motif
Other DBs
NCBI-ProteinID:
CDG10969
UniProt:
A0ABC9IE10
LinkDB
All DBs
Position
404905..406863
Genome browser
AA seq
652 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK
GLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
DQIRQQLETVLTAEQITSDARALQLLARAADGSMRDALSLTDQAIAMGQGQVTAATVSQM
LGTLDDEQPLAILEALVSADGEKVMAQVAQAASRGVDWENLLVETLALLHRIAMVQLLPS
MLDNHYAAVEQRLRELARTLPPADVQLYYQTLLVGRKELAYAPDRRMGVEMTLLRALAFH
PKAVIPEPVALVQTAPAPMAQPQQATSPQPPQFQDVPPPLGQPAAPQRQSSTPLPDATAQ
LLKARSQLQRQQGASTPKKNEPAAPGIARPANSALGRLASVTERSQQRLAEKKVPEKPAK
PEAYRWRAQTEPEAAPEPLATPKALRTALEHEKTPELAAKLVVESLERDAWAAEIDKLKI
PKLVQQLALNAFKQQPEPGKINLHLRSSQRHLNSPSAQKTLAEALGELYGSPVELTVVED
DNPAERTPLEWRQAIYEEKLAQARQSIVADTHIQTLCRFFDADLDEESIRPL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctcgcccgtaagtggcgccctcaaacgttcgcagacgtggtcggc
caggaacatgtcctgaccgcgctggccaacggcctctcgctggggcggatccatcacgcc
tatctgttctcgggtacgcgcggcgtggggaaaaccaccatcgcccgcttgctggccaaa
ggcctgaactgtgaaaccggcatcaccgccacgccgtgcggccaatgcgacaactgccgc
gagatcgagcaggggcgcttcgtcgatctgatcgagatcgacgccgcttcccgaaccaag
gtggaagatacccgcgatctgctggacaacgtccagtacgcaccggcgcgcggccgcttc
aaggtctacctgatcgacgaagtgcacatgctctcgcgccacagcttcaacgcgttgctg
aagacgttggaagagccgccgccgcacgtcaaattcctgttggccaccaccgatccgcaa
aagctgccggtgaccattctctcgcgctgtctgcagttccacctcaaagcgctggacgtc
gatcagatccgtcagcagctggaaacggtgctgacggcggagcagatcaccagcgacgcg
cgtgcgctgcagctgctggcgcgcgccgccgacggcagcatgcgcgacgcgctgagcctg
accgatcaggcgatcgccatggggcaggggcaggtgacggccgccaccgtcagccagatg
ctcggcacgctcgatgacgagcagccgctggcgatcctcgaagcgctggtcagcgccgac
ggcgaaaaggtgatggcgcaggtcgcgcaggccgcttcgcgcggcgtggactgggaaaac
ctgctggtggagacgctggcgttgctgcaccgcattgcgatggtgcaactgctgccttcg
atgctcgacaaccactacgccgccgtggaacaacggctgcgtgagctggcgcgcactctg
ccgccggccgatgtgcaactctattaccaaacgctgttggtgggccgcaaagagctggcc
tatgcgccggatcgtcgcatgggggttgagatgaccctgctgcgtgcgctggcgtttcac
ccgaaagcggtgatcccggagccggtggcgttggtgcagaccgcgccggcgccgatggcg
caaccgcagcaggccacatcgccacagccgccgcagtttcaggacgtgccgcccccgcta
gggcagccggccgcgccgcagcgacaatcatcgacccctttaccggatgccaccgctcag
ctgttgaaagcgcggtcccagctgcaacggcagcagggagcatccacaccaaaaaagaat
gagccggcggcgccaggaatagcgcggccggcaaactcggcgctggggcgtttggcttcc
gtgaccgagcgtagccagcagcgcctggcggagaagaaggtgccggaaaaaccggcgaag
ccggaagcctatcgctggcgcgcgcagaccgagccggaagcggcgccggaaccgttggcg
acgccgaaagcgctgcgcacggcgttggagcacgagaaaacgccggagctggccgccaag
ctggtggtggaatcgctggagcgcgacgcctgggcggcggaaatcgataagctcaagatc
ccgaaactggtgcagcagctggcgttgaacgccttcaagcagcagccggaaccgggcaag
attaacctccatctgcggtcttcgcagcgccatctgaattcgccttcggcgcagaagacg
ctggccgaagcgctcggcgagctgtacggcagcccggttgagctgaccgtggtggaggac
gataatccggcggagcgcaccccgctggagtggcgacaagccatctatgaagaaaagctg
gcgcaggcgcgccagtccatcgttgcggatacccatatccagacgctgtgccggttcttc
gacgcggatctggatgaagagagtatccgccccctttaa
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