Serratia marcescens subsp. marcescens Db11: SMDB11_0464
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Entry
SMDB11_0464 CDS
T03985
Symbol
miaB
Name
(GenBank) isopentenyl-adenosine A37 tRNA methylthiolase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smac03016
]
SMDB11_0464 (miaB)
Enzymes [BR:
smac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SMDB11_0464 (miaB)
Transfer RNA biogenesis [BR:
smac03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SMDB11_0464 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
CDG11050
UniProt:
A0ABC9IE76
LinkDB
All DBs
Position
complement(490153..491577)
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AA seq
474 aa
AA seq
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MTKKLHIKTWGCQMNEYDSSKMADLLNSTHGFEWTDNAEEADVLLLNTCSIREKAQEKVF
AMLGRWRLLKEKNPSVIIGVGGCVASQEGELIRSRAPCVDVVFGPQTLHRLPEMINHVQG
TRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPSDD
VLFEIAQLAAQGVREVNLLGQNVNAYRGATHDGDICSFAELLRLVAAIDGIDRIRFTTSH
PIEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRAHTALEYKAIIRKLRKARPAI
QLSSDFIVGFPGESQADFEQTMNLIADVNFDVSFSFIYSSRPGTPAADMVDDVSEEEKKQ
RLYILQDRINQQALQFSRRMLGTVQRILVEGTSRKSVMELAGRTECNRVVNFEGTPDMIG
QFVDVEITEVLTNTLRGAVVRTEQQMDLRVHESPQSVIARTRKENALGVGIYQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaaactacatatcaaaacctggggctgccagatgaatgagtacgattcatcg
aaaatggccgacctgttgaacagcacgcacggcttcgagtggaccgacaacgccgaggaa
gcggacgtgctgttgctgaacacctgctcgatccgtgaaaaagcgcaggagaaagttttc
gccatgctggggcgctggcgcttgctgaaagagaagaacccgtctgtcatcatcggcgtc
ggcggttgcgtggcctcgcaagaaggcgaactgatccgcagccgcgcgccttgcgtcgac
gtggtattcggcccgcagaccctgcaccgcctgccggaaatgatcaatcacgttcagggc
acccgcagcccggtggtcgatatcagcttcccggagatcgaaaaattcgaccgcctgccg
gagccgcgcgccgaaggcccgaccgccttcgtgtcgatcatggaaggctgcaacaaatac
tgcactttctgcgtggtgccttacacccgcggcgaggaagtgagccgcccgagcgacgac
gtgctgttcgaaatcgcccagctggcggcgcagggcgtgcgcgaggtcaacctgctcggc
caaaacgtcaacgcttaccgcggcgcgacgcatgacggcgatatctgctcattcgccgaa
ctgctgcgcctggtggcggccatcgacggcatcgatcgcattcgcttcaccaccagccac
ccgatcgagttcaccgacgacattatcgcggtgtacgaagacacgccggagctggtcagc
ttcctgcatctgccggtgcagagcggttcggaccgcatcctgaccatgatgaaacgcgcg
cacaccgcgctggagtataaggcgattatccgcaagctgcgcaaggcgcggccggccatc
cagctgagctccgatttcatcgtcggtttcccgggcgaaagccaggccgacttcgaacag
accatgaacctgatcgccgacgtcaacttcgacgtcagcttcagcttcatctattcgtcg
cgccccggtacgccggcggcggacatggtcgacgacgtcagcgaagaagagaaaaagcag
cggctgtacattctgcaggatcgcatcaaccagcaggcgctgcagttcagccgccgcatg
ctcggcaccgtccagcgcattctggtggagggcacctcgcgtaaaagcgtgatggagctg
gccgggcgcacggagtgcaaccgtgtggtaaacttcgaaggcacgcccgacatgatcggc
caatttgtcgacgtggaaattaccgaggtgctgaccaacaccctgcgtggcgcagtggtg
cgcaccgaacagcagatggatctgcgcgtacatgaatccccgcagtcggtgatcgcccgt
acccgcaaagaaaacgcgctgggcgtcggcatttaccagccctga
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