Serratia marcescens subsp. marcescens Db11: SMDB11_0495
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Entry
SMDB11_0495 CDS
T03985
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_0495 (phrB)
Enzymes [BR:
smac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SMDB11_0495 (phrB)
DNA repair and recombination proteins [BR:
smac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SMDB11_0495 (phrB)
Prokaryotic type
SMDB11_0495 (phrB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF1815
Motif
Other DBs
NCBI-ProteinID:
CDG11079
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All DBs
Position
527261..528691
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AA seq
476 aa
AA seq
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MTTHLVWLRNDLRITDNKALHAACSDPKARVLAVFIATPEQWRQHEMAPRQAALIHASLQ
AVQQALAQKGIALHCHACADFAASIDWLADYCEREQVDALFYNRQYELNERRRDVRLEQQ
LNGRVTCHGFDDSLLLPPGSVLTGGGEMYKVYTPFRNAFIQRLTESDVSCLPAPKIRADG
ALPAPEAPAAFDYPAAEIGDDYPAGEEAALQRLRAFCREQVQDYLRQRDLPAIAGTSSLS
PYLAIGALSPRQCFNRLRAECPQLLEDRESGAFAWLNELIWREFYRHLLVAYPALCRYRP
FIAWTDKVRWCDDAAKLQAWQRGETGYPIVDAAMRQLNATGWMHNRLRMISASFLVKDLL
IDWRAGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGTFIR
KWLPELADVPDNDIHHPHRWAEKQRCTLNYPLPIVDHKQARMETLAAFEAAKRGES
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggttgcgtaacgatctgcgtatcaccgacaacaaagccctg
cacgccgcctgcagcgatccgaaagcccgggtgctggcggtgtttatcgccacaccggag
cagtggcggcaacatgagatggcgccgcggcaggcggcgctgatccacgccagcctgcag
gcggtgcaacaggcgctggcgcaaaagggcattgcgctgcattgccatgcctgtgcggac
tttgccgcgtcgatcgactggctggcggactattgcgagcgagagcaggtagatgcgctg
ttttacaaccgccagtatgaactgaatgaacggcgacgcgatgtgcggctggagcagcag
ttgaatggacgggtaacgtgccacggttttgatgacagcctgctgttgccgccgggcagc
gtgctcaccggcggcggcgagatgtacaaggtttatacgccgtttcgcaacgcctttatt
cagcgcctgaccgagtccgacgtgagctgcctgccggcgccgaagatccgtgccgatggc
gcgttgcctgcgcctgaggcgccggcggcgttcgattatcccgcggcggaaattggggat
gactatcccgccggcgaggaggccgcgctgcagcggctgcgcgccttttgtcgtgagcag
gtgcaggattaccttcggcagcgcgatctgcccgccatcgccggcaccagcagcctgtcg
ccctatctggcgatcggtgcgctgtcgccgcgccagtgcttcaaccgcctgcgcgccgaa
tgcccgcagctgctggaagatcgcgagagcggcgctttcgcctggctgaacgagctgatt
tggcgcgagttctaccgtcatctgctggtggcttatcccgcgttgtgccgctatcggcca
tttatcgcctggacggacaaggtgcgctggtgcgatgacgcggcgaagctgcaggcctgg
cagcggggcgaaaccggttatccgatcgtcgatgccgccatgcgccaactgaatgccacc
ggctggatgcacaaccggctgcgcatgatcagcgccagttttctggtgaaagatctgctg
atcgactggcgcgccggggagcgctatttcatgtcgcaactgctggacggggatctggcg
gccaacaacggcggctggcagtgggcggcctccaccggcaccgacgccgcgccgtatttc
cgcatctttaacccgaccacccagggtgaacgttttgatccacaaggcacttttatccgt
aaatggttgccggaactggcggatgtgcccgacaatgacatccatcatccccatcgctgg
gcggaaaagcagcgatgcacgctgaactacccgctgccgatcgtcgatcacaaacaagcc
cgcatggagacgttggcggcgttcgaggcggcgaaacggggagagtcttga
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