Serratia marcescens subsp. marcescens Db11: SMDB11_0508
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Entry
SMDB11_0508 CDS
T03985
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00020
Citrate cycle (TCA cycle)
smac00190
Oxidative phosphorylation
smac00650
Butanoate metabolism
smac00720
Other carbon fixation pathways
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01120
Microbial metabolism in diverse environments
smac01200
Carbon metabolism
Module
smac_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smac_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smac_M00149
Succinate dehydrogenase, prokaryotes
smac_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SMDB11_0508 (sdhA)
00650 Butanoate metabolism
SMDB11_0508 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SMDB11_0508 (sdhA)
00720 Other carbon fixation pathways
SMDB11_0508 (sdhA)
Enzymes [BR:
smac01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SMDB11_0508 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
FAD_binding_3
RBD_DGKtheta
Motif
Other DBs
NCBI-ProteinID:
CDG11092
UniProt:
A0ABC9IEN3
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All DBs
Position
539051..540817
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AA seq
588 aa
AA seq
DB search
MKLPVREFDAVVIGAGGAGMRAALQISQAGSTCALLSKVFPTRSHTVSAQGGITVALGNS
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG
GQSLNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGT
TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGMHLQ
ESLEEQGVSRDASDSDVEASLDRLNRWNNTRSGEDPVEIRKALQSCMQHNFSVFREGDAM
AKGLEELKVIRERLKNARLDDTSSEFNTQRIECLELDNLMETAYSTAVSANFRTESRGAH
SRFDYPERDDANWLCHSLYLPQSESMTRREVNMQPKLRPAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccagtcagagagtttgacgccgtcgtaatcggcgccggcggtgcgggcatg
cgtgccgcgctgcaaatttcccaagcgggctcgacctgtgccctgctgtccaaagttttc
ccgacccgttcccataccgtgtccgcacagggcggcattaccgtcgcgcttggcaacagc
cacgaggacaactgggaatggcatatgtacgacacggtgaaaggttccgactatatcggt
gaccaggacgccatcgaatatatgtgtaaaaccggcccggaagcgattctggaactggaa
cacatgggcctgccgttctctcgtctggacgacggccgcatctatcagcgtccgttcggc
ggtcagtcgctgaacttcggcggcgagcaggcggcgcgtaccgcagccgcagccgaccgt
accggtcacgcgctgttgcacaccctgtaccaacagaacctgaaaaatcacaccaccatc
ttctccgagtggtatgcgctcgatctggtgaaaaaccaggacggcgcggtggtcggcacc
acggctatctgcatcgaaaccggtgaagtggtttacttcaaagccaaggccaccgtgctg
gcgaccggcggcgcaggccgtatttatcagtccaccaccaacgcccacatcaacaccggc
gacggtgtcggcatggcgctgcgcgctggcgtgccggtgcaggacatggaaatgtggcag
ttccacccgaccggcatcgctggcgcgggcgtactggtgactgaaggctgccgcggcgaa
ggcggttacctgctgaacaaacacggcgagcgcttcatggagcgttatgcgccgaatgcc
aaagatctggcgggccgcgacgtggttgcccgttcgatcatgatcgaaatccgcgaaggc
cgcggttgcgacggtccttggggcccgcacgccaagctgaagctggatcacctgggcaaa
gaggtactggaatcccgtctgccgggcattctggagctgtcccgcactttcgcgcatgtc
gatccggtgaaagagccgatcccggttatcccaacctgtcactatatgatgggcggcatt
ccgaccaaggtgaccggccaggcgctgaccgtgaacgagaagggtgaagacgtggtgatc
ccggggctgttcgccgtgggcgaaatcgcctgcgtatcggtgcacggcgccaaccgcctg
ggcggcaactcgctgctcgacctggtggtgttcggccgttccgccggcatgcacctgcag
gaatcgctggaagagcagggcgtgagccgtgacgccagcgactccgacgtggaagcctcg
ttggaccgtctgaaccgttggaacaacacccgttccggtgaagacccggtcgaaattcgc
aaagcgctgcagtcttgcatgcagcacaacttctcggtattccgtgaaggcgatgcgatg
gccaagggcctggaagaactgaaagtgatccgtgaacgtctgaagaacgcacgcctggac
gatacctccagcgagttcaacacccagcgcatcgagtgcctggagttggataacctgatg
gagaccgcgtattccaccgccgtgtcggccaacttccgtaccgagagccgtggcgcacac
agccgcttcgactacccggaacgcgatgacgccaactggctgtgccattcgctgtatctg
ccgcaatcggaaagcatgacgcgtcgtgaagtgaacatgcaaccgaagctgcgcccggca
ttcccgccgaaagtgcgttcttactaa
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