Serratia marcescens subsp. marcescens Db11: SMDB11_0733
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Entry
SMDB11_0733 CDS
T03985
Symbol
prpR
Name
(GenBank) DNA-binding transcriptional activator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_0733 (prpR)
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
Other families
SMDB11_0733 (prpR)
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Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
HTH_30
AAA
Xre-like-HTH
HTH_psq
HTH_23
AAA_2
HTH_1
AAA_3
HTH_Tnp_ISL3
HTH_24
AAA_16
HTH_29
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
CDG11315
UniProt:
A0ABC9IEZ4
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Position
complement(763447..765048)
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AA seq
533 aa
AA seq
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MSDHITPSRAPDKPVIWTVSITRLFDLFRDISLEFDHLATITPIRLGFEEAVQHIRARLA
TEPCDAIIAAGSNGAYLKSRLSVPVILVKPGGFDLLQALSKARRTADRIGVITYKTPLPA
LMEFQQTFDLPLEQRSYVTEEDARGQIAELKAAGIQAVVGAGLISDLAEEAGLTAIFLYS
AATLRAAFSDALDVTRLMLSGGKRGGDYAARDTLQPRYGLGDLQGDSPQMEQTRRTIMLY
ARSPAAVLIEGETGTGKELAAQAIHREYFSRRGAPSRGATPPFVAINCGAIAESLLEAEL
FGYEEGAFTGSRRGGRRGLLETANGGTLFLDEIGEMPLHLQTRLLRALEEKTITRVGGQQ
PVTVDFRVISATHTRLEQAIQRGGFRADLFYRLSALRLQLPPLRARGDDIAMLAEHFLKQ
SLAALDVPLTEPLRTALAGCYAALSHYAWPGNLRELRNMMERVALMLSTGAAPSGETLQW
LLPELAAVTPPETQAAPISAHEALARCGGDHAAAARLLGISRTTLWRRLKKPN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcacatcacgccatcccgcgcgccggacaaaccggtgatctggactgtctcc
atcacccgcctgttcgatctgttccgggacatcagcctcgagttcgaccatctggcgacc
atcaccccgatccgtctcggcttcgaggaggcggtgcagcacatccgcgcacgcctggcg
accgaaccgtgcgacgccatcatcgccgccggctccaacggcgcctacctgaaaagtcgc
ctgtcggtgccggtcatcctggtcaagcccggcggcttcgacctgctgcaggcgctgagc
aaggcgcgcagaaccgccgatcggatcggcgtcatcacctataaaacgcctttgcccgca
ctgatggagttccagcaaaccttcgatctgccgctggaacagcgcagttacgtcaccgaa
gaggacgcccgcggccagatcgccgagctgaaagccgccggtattcaggcggtggtcggc
gccggcctcatcagcgatctggcggaagaggccgggctcaccgccatttttctctattcc
gccgccaccctgcgcgccgccttcagcgatgcgctggacgtaacgcgcctgatgctgagc
ggcggcaaacgcggcggcgattacgccgcacgcgataccctgcagccacgctatgggctg
ggcgatttgcagggcgactccccgcagatggagcagacccggcgcaccatcatgttgtac
gcccgctcgccggcggcggtattaattgaaggagaaaccggcactggcaaagagctggcg
gcgcaggcaatccaccgcgaatacttttcccggcgcggcgcaccgtccaggggggcgacg
ccgccgttcgtcgccatcaactgcggcgccatcgccgaatcgctgctggaggcggaactg
ttcggctatgaggaaggcgccttcaccggatcacggcgcggcggccggcgcgggctgctg
gaaaccgccaacggcggcactctgtttctggatgagatcggcgaaatgccgctgcacctg
caaacgcgactgctgcgcgcgctggaagagaaaactatcacccgggtgggcgggcaacag
ccggtaacggtcgactttcgcgtcatcagcgccacccacacccgcctggagcaggcgatt
caacggggcggttttcgcgccgatctgttttatcgcctgagcgccctgcggctgcagctg
ccgccattgcgggcgcgcggcgacgatattgcgatgctggcggaacactttctgaaacag
tcgctggcggcgctcgatgtgccgctgacggagccgctgcgcaccgccctggccggctgt
tacgccgcgctaagccattacgcctggcccggcaacctgcgcgaactgcgcaacatgatg
gaacgggtagcgctgatgctgagcaccggcgcagcgccgagcggtgaaacgctgcagtgg
ctgttgccggagctggcggcggtcacgccgcccgagacgcaggcggcgcccatctccgcc
cacgaagccctggcgcggtgcgggggcgaccacgccgccgccgcccggttgctcgggatc
agccgcaccaccttatggcgccggctgaaaaaaccgaactga
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