Serratia marcescens subsp. marcescens Db11: SMDB11_0902
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Entry
SMDB11_0902 CDS
T03985
Name
(GenBank) putative cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00260
Glycine, serine and threonine metabolism
smac00270
Cysteine and methionine metabolism
smac00450
Selenocompound metabolism
smac00670
One carbon pool by folate
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01230
Biosynthesis of amino acids
Module
smac_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SMDB11_0902
00270 Cysteine and methionine metabolism
SMDB11_0902
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SMDB11_0902
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SMDB11_0902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smac04147
]
SMDB11_0902
Enzymes [BR:
smac01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
SMDB11_0902
Exosome [BR:
smac04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SMDB11_0902
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CDG11481
LinkDB
All DBs
Position
complement(947151..948296)
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AA seq
381 aa
AA seq
DB search
MAKFDTLTVHAGYTPDATGAVMPAIYATSTYAQPAPGEHTGYEYSRSANPTRTALESAIA
ELEGGSRGYAFASGLAACSTVLELLDKDSHLIAVDDLYGGTYRLLEKVRSRTAGLRVTYV
SPADLAGLEQAIEPDTKMIWVETPTNPLLKLADLSAIAAIAKKHQLISVADNTFASPYLQ
RPLDLGFDVVVHSATKYLNGHSDVVAGVAAVGDNPALAEQLGFLQNAVGGILDPFSSFLT
LRGIRTLALRMQRHSDSALRIAQWLESQPQVENVYYPGLPSHPQHELAARQMTRFGGMIS
VRLKGDDAYARRVIQRSRLFTLAESLGGVESLISQPFSMTHASIPLEQRLATGITPQLVR
LSVGIEDVEDLIADLQQALAE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtttgatacgttgaccgttcacgccggttacaccccggacgcgaccggcgca
gtgatgccggcgatttacgccacctccacctacgcccaaccggcaccgggcgagcatacc
ggctacgaatactcccgcagcgccaacccgacgcgcacagcgctggaaagcgccatcgcc
gaactggaaggcggcagccgcggctacgccttcgcctccggtctggcggcctgctccacg
gtgctggagctgctcgataaagacagccacctgatcgcggtagacgacctgtacggcggc
acctatcgcctgctggaaaaagtgcgcagccgcaccgccggcctgcgcgtgacttacgtg
tcgccggcggatctcgccgggctggaacaggcgatcgaaccggataccaaaatgatctgg
gtcgaaacgccgaccaacccgctgctcaagctggcggatctgagcgccatcgccgcgatc
gccaaaaagcatcagctcatcagcgtggcggacaacaccttcgcctcgccgtatctgcaa
cgtccgctggatctaggttttgacgtggtggtgcactccgccaccaaatacctcaacggc
cactccgacgtggtggcgggcgtcgcggcggtgggggataacccggcgctggcggaacag
ctcggcttcctgcaaaacgcggtcggcggcattctcgatccgttcagcagcttcctgacg
ctgcgcggcattcgcaccctggccctgcgcatgcagcgccacagcgacagcgcgctgcgc
atcgcccagtggctggagagccagccgcaggtggaaaacgtctactatcccggcctgccg
agccatccgcagcatgagctggcggcacgccagatgacgcgcttcggcggcatgatctcg
gtacggctgaaaggcgacgacgcctatgcgcgtcgggtcatccagcgttcgcgcctgttc
accctggcagaaagcctgggcggcgtggaaagcctgattagccagccgttcagcatgacg
cacgcctccattccgctggaacagcgcctggcaaccggcatcacgccgcagctggtgcgc
ctgtcggtagggattgaggatgtggaagatctgatcgccgatctgcagcaggcgctggcg
gaataa
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