Serratia marcescens subsp. marcescens Db11: SMDB11_1003
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Entry
SMDB11_1003 CDS
T03985
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00541
Biosynthesis of various nucleotide sugars
smac01100
Metabolic pathways
smac01250
Biosynthesis of nucleotide sugars
Module
smac_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SMDB11_1003 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
smac01005
]
SMDB11_1003 (kdsB)
Enzymes [BR:
smac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
SMDB11_1003 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
smac01005
]
Lipid A
SMDB11_1003 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
CDG11578
UniProt:
A0ABC9IFX8
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Position
1057604..1058353
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AA seq
249 aa
AA seq
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MSFIAIIPARYASTRLPGKPLADIHGKPMVVHVMERARESGASRVIVATDHLEVAKAVEA
AGGEVCMTSPDHHSGTERLAEVIAHYGFADDQIIVNVQGDEPLIPPVIVRQVAENLAGSQ
AGMATLAVPIESAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRERFAASKESIGDSLLR
HIGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAIPSVGVDTPEDL
QRVRDSIQP
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatcgctattattcccgcccgctacgcctcaacccgtttgccgggcaaaccg
ctggccgatattcacggtaagccgatggtggtgcacgtgatggagcgtgcccgtgagtcc
ggcgccagccgcgtcatcgtggcgaccgatcaccttgaggtcgccaaagcggtggaagcc
gccggcggcgaagtgtgcatgaccagcccggatcaccattccggcaccgagcgtctggcg
gaagtgatcgcgcactacggctttgccgacgaccagatcatcgttaacgtgcagggcgac
gaaccgctgatcccaccggtgatcgtgcgtcaggtcgcagagaatctggcgggcagccag
gccggcatggcgacgttggcagtgccgatcgagagcgcggaagaggctttcaaccccaac
gcggtgaaggtcgtaatggacgcacagggctacgcactctatttctcacgcgccaccatt
ccgtgggatcgcgaacgtttcgctgcgtcgaaagagagcatcggcgacagcctgctgcgt
cacatcggcatctatgcgtaccgtgccggtttcgtgcgccgctacgtcagctgggcgccg
agccaactggaacagatcgagctgttggaacagctgcgcgtgctgtggtacggtgaaaaa
atccacgtggcggtcgcgaaagcgatcccgagcgtgggggtcgatacgccggaagatctc
cagcgcgtgcgcgacagcattcaaccctga
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