Serratia marcescens subsp. marcescens Db11: SMDB11_1270
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Entry
SMDB11_1270 CDS
T03985
Symbol
kdsA
Name
(GenBank) 3-deoxy-D-manno-octulosonate8-phosphatesynthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00541
Biosynthesis of various nucleotide sugars
smac01100
Metabolic pathways
smac01250
Biosynthesis of nucleotide sugars
Module
smac_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SMDB11_1270 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
smac01005
]
SMDB11_1270 (kdsA)
Enzymes [BR:
smac01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SMDB11_1270 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
smac01005
]
Lipid A
SMDB11_1270 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
MjAgo_N-like
Motif
Other DBs
NCBI-ProteinID:
CDG11846
UniProt:
A0ABC9IGC5
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Position
1330676..1331530
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AA seq
284 aa
AA seq
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MKQKVVSIGDIDVANDLPFVLFGGMNVLESRDLAMSICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFEELKKTFGVKIITDVHEVAQAQPVSEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNDQVILCDRGSNFGYDNLVVD
MLGINVMKNVTGGHPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGLAGLFLEA
HPDPNNAKCDGPSALPLDKLEPFLAQMKAIDDLVKSFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaaagtggttagcattggcgacatcgacgtagcaaacgacctgccgtttgtg
ctgtttggcggtatgaacgtgctggaatcgcgcgatctggcgatgagcatctgcgagcac
tacgtcaccgtgacgcaaaaactgggcattccttacgtattcaaagcctctttcgacaaa
gccaaccgttcttccatccactcgtaccgcggtccgggcctggaagaagggatgaagatc
ttcgaagagctgaagaaaaccttcggcgtgaaaatcatcaccgacgtgcatgaagtggcg
caggcgcagccggtttctgaagtggttgacgtgatccaactgccggccttcctggcgcgt
cagaccgatctggtggaagcgatggcgaaaaccggcgcggtgatcaacgtcaagaagcca
cagttcgtcagcccggggcagatgggcaacatcgtcgacaaattcaaagaaggcggcaac
gaccaggtgatcctgtgcgatcgcggcagcaactttggttatgacaacctggtggtcgac
atgctgggcatcaacgtgatgaagaacgtgaccggcggccatccggtgatcttcgacgtg
acccacgcgctgcagacccgcgatccgttcggcgccgcgtccggcggccgccgcgctcag
gtggccgagttggcgcgcgccggcatggcggttggcctggccggcctgttcctcgaagcg
cacccggatccgaacaacgccaagtgcgacggtccttccgcgctgccgttggacaagctg
gagccgttcctggcgcagatgaaagccatcgacgacctggtgaagagcttcccggagctg
gataccagcaactaa
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