Serratia marcescens subsp. marcescens Db11: SMDB11_1428
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Entry
SMDB11_1428 CDS
T03985
Symbol
arnB
Name
(GenBank) uridine 5'-(beta-1-threo-pentapyranosyl-4-ulosediphosphate) aminotransferase, PLP-dependent
KO
K07806
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:
2.6.1.87
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00541
Biosynthesis of various nucleotide sugars
smac01100
Metabolic pathways
smac01250
Biosynthesis of nucleotide sugars
smac01503
Cationic antimicrobial peptide (CAMP) resistance
smac02020
Two-component system
Module
smac_M00761
Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SMDB11_1428 (arnB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SMDB11_1428 (arnB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SMDB11_1428 (arnB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smac01007
]
SMDB11_1428 (arnB)
Enzymes [BR:
smac01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.87 UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SMDB11_1428 (arnB)
Amino acid related enzymes [BR:
smac01007
]
Aminotransferase (transaminase)
Others
SMDB11_1428 (arnB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
SepSecS
PaaX_M
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CDG12002
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Position
1491212..1492366
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AA seq
384 aa
AA seq
DB search
MDQFLPFSRPAIGDEEIAAVEKVLRSGWITTGPQNQQLESDFCSTFGCKHAIAVSSATAG
MHITLMALGVGPGDEVITPSQTWVSTLNMIELLGATPVMIDVDRDTLMVSAADVEAAITP
NTKAIVPVHYAGAPLQMDALRAVAERHGLPLIEDAAHAVGTRYNGEWVGARGTAIFSFHA
IKNVTCAEGGLIATDDDALADRLRCLKFHGLAVDAFDRQQLGRKPQAEVVEPGYKYNLSD
IHAAIAVVQLSRFAELNARRKALAQRYLSALEGSPFQPLGVPDYPHDHAWHLFMVRVDPE
RCGLDRDQLMERLKEVGIGTGLHFRAAHTQKFYRERYPQLSLPNTEWNSARLCTLPLFPD
MTDADVDRVVNALSSVVESLRVSR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatttttgcctttctctcgtccggccatcggcgatgaagaaatcgccgcggta
gagaaagtgttgcgttccggttggatcaccaccgggccgcaaaaccagcagctggaaagc
gacttctgttccaccttcggctgtaagcacgccatcgcggtcagttccgccacggcgggc
atgcacatcacgttaatggcgcttggcgtcggccctggcgacgaagtcatcaccccttcg
caaacctgggtctccaccctcaacatgatcgagctgctgggcgccacgccggtgatgatc
gatgttgaccgcgatacgttgatggtcagcgccgccgacgtcgaggctgccatcaccccg
aataccaaagcgattgttccggtgcattacgccggtgcccccctgcagatggatgcgctg
cgcgccgtggccgaacgccatggtctgccgctgatcgaagacgccgcccacgcggtcggc
acgcgctacaacggcgaatgggtcggcgcgcgcggcacggcgattttctctttccatgcg
atcaaaaacgtgacctgcgccgaaggcggcctgatcgccaccgacgacgatgcactggcg
gatcgcctgcgttgcctgaagttccacggtctggccgtcgatgccttcgatcgccagcag
cttggccgcaaaccgcaggccgaagtggtggaaccggggtacaaatacaatctgtccgac
attcacgcggcgatcgccgtggtgcaactttcgcgcttcgccgagctgaacgcgcgtcgc
aaggcgctggcgcagcgctacctgagcgcgctggaaggctcgccgttccaaccgttgggc
gtgccggattatccgcatgaccacgcctggcacctgtttatggtgcgcgtcgatcccgag
cgctgcggcctcgatcgcgaccagctgatggagcgcctgaaagaggttggcatcggcacc
gggctgcatttccgtgccgcgcacacccagaaattctaccgtgagcgctatccgcagctt
tcattgccgaataccgaatggaactcggcgcggctgtgcaccttaccgctattccctgat
atgaccgacgccgacgtggatcgcgtggtcaatgccttgtcttctgttgtggagtcttta
cgtgtctcgcgttga
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