Serratia marcescens subsp. marcescens Db11: SMDB11_1967
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Entry
SMDB11_1967 CDS
T03985
Symbol
oppD
Name
(GenBank) oligopeptide transporter subunit
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac01501
beta-Lactam resistance
smac02010
ABC transporters
smac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SMDB11_1967 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMDB11_1967 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SMDB11_1967 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smac02000
]
SMDB11_1967 (oppD)
Transporters [BR:
smac02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SMDB11_1967 (oppD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
ABC_ATPase
DO-GTPase2
DUF87
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
CDG12543
UniProt:
A0ABC9IID0
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All DBs
Position
complement(2080948..2081964)
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AA seq
338 aa
AA seq
DB search
MSTIEHPQLQTGAGVKTSPLLDVKDLRVTFSTPDGDVTAVNDLTFDLRAGETLGIVGESG
SGKSQTAFALMGLLASNGRIGGSAKFNGREILNLPENQLNKLRAEEISMIFQDPMTSLNP
YMRVGEQLMEVLMLHKKLSKSEAFEESVRMLDAVKMPEARKRMRMYPHEFSGGMRQRVMI
AMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICNKV
LVMYAGRTMEYGSAREVFYQPSHPYSIGLLNAVPRLDAEGEALLTIPGNPPNLLRLPKGC
PFQPRCPYAMEQCASAPPLEQFGEGRLRACFKPVEALV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccattgaacatcctcaactacaaaccggcgccggcgtcaaaacgtcgccgctg
ctggacgtgaaagacctgcgcgtcacgttttccacgccggacggcgacgtgacggcggta
aacgatctgaccttcgatctgcgcgccggcgaaacgctgggcatcgtcggtgaatccggc
tcaggcaaatcgcagaccgcgttcgccctgatggggctgctggcgagcaatggccgcatc
ggcggctcggccaaattcaacggccgcgagatcctcaacctgccggaaaatcagcttaac
aagctgcgggccgaggagatctcgatgatcttccaggacccgatgacctcgctcaaccct
tatatgcgcgttggcgaacagctgatggaagtgctgatgctgcataagaagctgagcaaa
agcgaagccttcgaagagtcggtccgcatgctcgacgcggtgaaaatgccggaggcgcgc
aagcgcatgcgcatgtacccgcacgagttttccggcggtatgcgccagcgcgtgatgatc
gccatggcgttgctgtgccggccgaagctgctgatcgccgacgagccgaccaccgcgctg
gacgtgaccgtccaggcgcagatcatgacgctgctcaacgagctgaagcgcgagttcaac
accgccatcatcatgatcacccacgacctgggcgtggtggctggcatctgcaacaaggtg
ctggtgatgtacgccggccgcaccatggaatacggcagcgcgcgcgaggtgttctaccag
ccgagccatccgtactccattggtctgttgaatgcggtgccgcgtctcgacgccgaaggc
gaagcgttgttgaccattcccggcaacccgccgaacctactgcggttgccgaaaggctgc
ccgttccagccgcgctgcccgtacgccatggaacagtgcgcgagcgctccgccgttggag
caatttggggaagggcgcctgcgcgcctgctttaaaccggtggaggcgttagtatga
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