Serratia marcescens subsp. marcescens Db11: SMDB11_1988
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Entry
SMDB11_1988 CDS
T03985
Symbol
selU
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smac03016
]
SMDB11_1988 (selU)
Enzymes [BR:
smac01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
SMDB11_1988 (selU)
Transfer RNA biogenesis [BR:
smac03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SMDB11_1988 (selU)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
Rhodanese
AAA_22
T2SSE
Peptidase_S8
VacA
Motif
Other DBs
NCBI-ProteinID:
CDG12564
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Position
complement(2106190..2107299)
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AA seq
369 aa
AA seq
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MQGRADSDDYQRIFLQDVPLIDVRAPIEFQQGAFAQALNLPLMIDSERQAVGTCYKQHGQ
QAAIALGHSLVNGKLREQRTAAWLAACAERPEGYIYCFRGGLRSQLVQQWLHEAGVEYPR
IIGGYKALRNYLLGVLAQSAALPMALVGGNTGSGKTLLVNELADGVDLEGVARHRGSSFG
RTLAGQSSQIDFENRLAVLLLKKQHGGSRRWVLEDEGRIIGSNNLPLPLFNGMQQAPVAV
IDDPFDIRLARLQAEYIDGMREQFEQAYGVEDGWRQYDDYLHHGLFAIRRRLGLERFQQL
TQRLEAALRAQRLSGQGEAHREWLAPLLQQYYDPMYCYQLEKKAQRIVFRGNYAEVREFL
MTFSQKNGE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaagggcggacagcgacgattaccaacgcattttcctgcaggacgtgccgctg
attgacgtgcgcgcaccgatcgagtttcagcagggcgccttcgctcaggcactgaatctg
ccgctgatgatcgacagcgaacgccaggcggtcggcacctgctataagcagcatgggcaa
caagcggcgatcgcgctcggccacagcctggtgaacggcaaactgcgcgaacagcgcacc
gccgcctggctggcggcctgcgcagagcggcccgaaggctatatttactgcttccgcggc
gggctgcgctcgcagctggtgcagcaatggctgcatgaggccggcgtcgagtacccgcgt
atcattggcggttataaggcgctgcgcaattatttgctcggcgtgctggcgcaaagcgcg
gcattgccgatggccctggtgggcggcaataccggcagcggcaagacgttgctggtcaac
gaactggccgacggcgtcgatctggaaggcgtggcgcgccatcgcggttcatcttttggt
cgaacgctggcgggccagagctcgcagatcgattttgagaatcgtctggctgtgttattg
ctgaaaaaacagcatggtggcagccgccgttgggtgctggaagacgaagggcggatcatc
ggcagcaacaatctgccgctgccgctgttcaatgggatgcagcaggcgccggtggcggtg
atcgacgatccgttcgacattcgtctggcgcgtctgcaggcggaatatatcgacggcatg
cgcgaacagttcgaacaggcctatggtgtggaagacggctggcgacagtacgacgactat
ctgcaccacggcctgttcgccatacgccgccgcctggggctggaacgcttccagcagctg
acgcaacgactggaagcggcgctgcgggcacagcggctcagcggccagggcgaggcgcac
cgcgagtggctggcgcccctgttgcagcagtactacgatccgatgtattgctatcagttg
gaaaagaaagcccagcggattgtcttccgtgggaactatgcagaagtaagagaattcttg
atgacgttcagccagaaaaacggtgaataa
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