Serratia marcescens subsp. marcescens Db11: SMDB11_2027
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Entry
SMDB11_2027 CDS
T03985
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00061
Fatty acid biosynthesis
smac00071
Fatty acid degradation
smac01100
Metabolic pathways
smac01212
Fatty acid metabolism
smac02024
Quorum sensing
smac04146
Peroxisome
Module
smac_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SMDB11_2027 (fadD)
00071 Fatty acid degradation
SMDB11_2027 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SMDB11_2027 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMDB11_2027 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smac01004
]
SMDB11_2027 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smac04147
]
SMDB11_2027 (fadD)
Enzymes [BR:
smac01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SMDB11_2027 (fadD)
Lipid biosynthesis proteins [BR:
smac01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SMDB11_2027 (fadD)
Exosome [BR:
smac04147
]
Exosomal proteins
Exosomal proteins of breast milk
SMDB11_2027 (fadD)
Exosomal proteins of breast cancer cells
SMDB11_2027 (fadD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
CDG12603
LinkDB
All DBs
Position
complement(2144582..2146303)
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AA seq
573 aa
AA seq
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MIISNDFRSNTLDKVWLKRYPADVPAEIDADRYSSLIEMFEHAVQRYADQPAFINMGEVM
TFRKLEERSRAFAAYLQNELGLKKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYT
PRELEHQLNDSGASAIVIVSNFAHTLEKVVFNTQVKHVILTRMGDQLSAAKGTLVNFVVK
YVKRLVPKYNLPDAISFRSALQRGRRLQYVKPDIINSDLAFLQYTGGTTGVAKGAMLTHR
NMQANLEQAKAAYSPLFREGQELVVTALPLYHIFALTVNCLLFIDLGGRNLLITNPRDIP
GLVKELGKYPFTAMSGVNTLFNALLNNEEFHKLDFSTLRFSVGGGMSVQKAVAEKWEKTT
GKHLLEGYGLTECAPLVAGNPYDLKHYSGSIGLPVPSTDIRLVDDNGHDVPPGEPGELWV
KGPQVMLGYWQRPEATDEVLKDGWLATGDVVTVDDQGFVRIVDRKKDMILVSGFNVYPNE
IEDVVSQHPKVLECAAIGVPSEASGETVKICVVKKDASLTKEELLTHCRRHLTGYKVPKI
VEFRDELPKSNVGKILRRELRDELKTPKPADAA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgataattagtaatgatttcaggagtaataccttggataaggtctggttaaaacggtat
ccggcagatgtgcccgcagagattgatgccgatcgctattcgtcgttgatcgaaatgttt
gagcatgccgtgcagcgttatgccgatcagcccgcctttatcaacatgggcgaggtgatg
accttccgcaaactggaagaacgcagccgggctttcgcggcttacctgcaaaatgaactg
ggcctgaagaaaggcgaccgtgtcgcgctgatgatgcctaacctgttgcaataccccatc
gctctgttcggcattctgcgtgccggcatggtggtggtcaacgtcaacccgttgtatacc
ccgcgcgagctggagcaccagttgaacgatagcggggccagcgccatcgttatcgtttcc
aactttgcacatacgctggaaaaagtggtgttcaacacccaggtcaaacacgtgatcctg
acgcgcatgggcgaccagctttcggccgccaaaggcacgctggttaacttcgtggtcaaa
tacgtcaagcgcctggtgcccaaatacaacctgccggacgccatttcattccgcagcgcg
ctgcaacgcggccgccgtctgcaatatgtaaaaccggacatcattaatagcgatttggct
ttcctgcaatacaccggcggtaccaccggcgtggcgaagggcgcgatgctgacgcaccgt
aacatgcaggccaaccttgagcaggccaaggccgcttattccccgctgttccgtgaaggg
caggaactggtggtgacggcgttgccgctataccacattttcgcgctgacggtgaactgc
ctgctgtttatcgatctgggcgggcgcaatttgctgatcaccaacccgcgcgatattccg
gggctagtgaaggagctgggtaaatatccgttcaccgccatgagcggggtgaatacgctg
ttcaacgcgttgctgaacaacgaagagttccacaaactcgatttctctacgctgcgtttc
tcggtcggcggcggtatgtcggtgcaaaaagcggtggccgagaagtgggagaaaaccacc
ggtaaacacctgctggaaggctatggtctgaccgagtgcgcgccgctggtggccggtaac
ccttacgatctgaaacactacagcggcagcatcggcctgccggtgccgtcgacggacatt
cggttggtggacgacaacggccatgacgtgccgccgggcgaaccgggcgaactgtgggtc
aaagggccgcaagttatgttaggctattggcagcgtccggaagccaccgatgaagtgctt
aaagatggctggctggcgaccggcgatgtggtgaccgtggacgatcagggatttgtgcgc
atcgtcgaccgcaagaaagacatgatcctggtctcgggtttcaacgtgtatccgaacgag
attgaagatgtggtcagccagcacccgaaagtgctggaatgtgcggcaatcggcgtgccc
agcgaggcctccggtgaaacggtgaagatctgcgtggtgaagaaagacgcctcgctgacc
aaggaagagctgttgacccattgccgtcgccacctgaccgggtataaagtgcctaaaatt
gttgagttccgcgatgaactgccgaagtcgaacgtcggcaagattttgcggcgagaactg
cgcgatgagctaaaaacgccgaagccggccgatgccgcctag
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