Serratia marcescens subsp. marcescens Db11: SMDB11_2734
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Entry
SMDB11_2734 CDS
T03985
Symbol
truA
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smac03016
]
SMDB11_2734 (truA)
Enzymes [BR:
smac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SMDB11_2734 (truA)
Transfer RNA biogenesis [BR:
smac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMDB11_2734 (truA)
Prokaryotic type
SMDB11_2734 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
CDG13305
LinkDB
All DBs
Position
complement(2892719..2893540)
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AA seq
273 aa
AA seq
DB search
MSEVVSPAQPTLKVALGIEYDGSRYYGWQRQQEVASVQERLEQALSKVADAPINVLCAGR
TDAGVHATGQVVHFETTARRKDAAWTMGVNTHLPPDIAVRWVSPVADDFHARFSATARRY
RYIIFNHRYRPAVLQQGVTHFYHPLDADRMHRAAQALLGENDFTSFRAVQCQSRTPWRCV
KHVKVTRYGEYIVVDIKANAFVHHMVRNIVGSLMEIGCGNQDENWMAELLALKDRNLAAA
TARAEGLYLVAVDYPDHFGLPRPPMGPLFLPDD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggtggtctcgcccgctcagccgacgctgaaggtagcgctgggcatcgaatat
gacggcagccggtactacggctggcagcggcagcaagaagtggccagcgtgcaggagcgc
cttgagcaggcgttgagcaaggtggcggatgcgccgatcaacgtgctgtgcgccgggcgc
accgacgccggggtgcacgccaccgggcaggtggtgcatttcgaaaccaccgcgcgtcgc
aaggacgccgcctggacgatgggcgtgaacacccatttgccgccggacatcgcggtgcgc
tgggtgagccccgtcgccgacgattttcacgcgcgtttcagcgctaccgcgcgccgttac
cgctatattattttcaaccatcgctaccggccggcggtgttgcaacagggggtgacgcac
ttttatcacccgctggatgccgatcgcatgcaccgggcggcgcaggcgctgctgggcgag
aatgacttcacctcgttccgcgcggtgcagtgtcagtcgcgcaccccgtggcgctgcgta
aaacacgttaaggttacgcgctacggcgaatatattgtggtagatatcaaggcgaatgcc
tttgtgcatcacatggttcgcaatatcgtcggcagcctgatggagatcggctgcggcaat
caggatgagaactggatggccgagttgctggcgctgaaggatcgcaatctggcggcggcg
acggcgcgagccgaggggctgtatttggttgccgtggactatcccgatcattttggtcta
ccgcggccgccgatggggccgctgtttttgcccgacgattaa
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