Serratia marcescens subsp. marcescens Db11: SMDB11_2897
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Entry
SMDB11_2897 CDS
T03985
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00300
Lysine biosynthesis
smac01100
Metabolic pathways
smac01120
Microbial metabolism in diverse environments
smac01230
Biosynthesis of amino acids
Module
smac_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SMDB11_2897 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smac01002
]
SMDB11_2897 (dapE)
Enzymes [BR:
smac01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SMDB11_2897 (dapE)
Peptidases and inhibitors [BR:
smac01002
]
Metallo peptidases
Family M20
SMDB11_2897 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
CDG13463
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Position
3057707..3058834
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AA seq
375 aa
AA seq
DB search
MTCPVIELAQQLIKRPSLSPNDEGCQQLMIDRLQAIGFTVEAMDFEDTQNFWAWRGEGQT
LAFAGHTDVVPTGDEKRWDNPPFEPAIRDGMLYGRGAADMKGSLAAMVVAAERFVAANPN
HRGRLAFLITSDEEASATHGTVKVVEALMARNERLDYCLVGEPSSTERVGDVVKNGRRGS
ITANLHIHGVQGHVAYPHLADNPVHRAMPALNELVAIEWDRGNEFFPPTSMQIANVQAGT
GSNNVIPGDLYVQFNFRFSTELTDAMIKQRVEELLERHQLNYSIEWRLSGQPFLTSRGAL
VDAVVNAVEHYSELTPQLLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVNAADLQ
LLSRMYQRIMEQLVA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcccggttatcgaactggcccagcagttgatcaaacgcccttccctcagcccg
aatgacgaaggctgccagcagctgatgatcgatcgcctgcaggcgatcggcttcaccgtc
gaagcaatggacttcgaagatacccaaaacttctgggcctggcgcggtgaagggcaaacc
ctggcgtttgccgggcacaccgacgtggtgccgaccggtgatgaaaaacgctgggacaac
ccgccgtttgaaccggcaatccgtgacggcatgctctatggccgcggcgcggcggacatg
aaaggctcattggccgcgatggtggtggccgcggaacgctttgtcgccgccaacccgaat
caccggggccgtctggcattcctgatcacttcggatgaagaagccagcgccactcacggc
acggttaaagtggtcgaagcgctgatggcgcgcaacgagcggctggattactgcctggtc
ggcgagccgtccagcaccgagcgcgtcggcgacgtggtgaaaaatggccgtcgtggctcc
atcaccgccaacctgcatatccacggcgtacaggggcacgttgcctatccgcatctggcg
gacaatccggtgcaccgcgccatgccggcactgaatgaactggtggcgatcgaatgggat
cgcggcaacgagttcttcccgccgaccagtatgcagatcgccaacgtgcaggccggcacc
ggcagcaacaacgtgatcccgggcgatctctacgtgcagttcaacttccgtttcagcacc
gaactgaccgacgcgatgatcaagcagcgcgtggaagagctgctggaacgccatcagttg
aattacagcatcgaatggcggctgtccggccaaccgttcctcacctcgcgcggcgcgctg
gtggatgcagtggtcaacgcggtcgagcactattctgaattgacgccgcagttgctgacc
accggcggcacctccgacggccgcttcatcgcgcagatgggcgcgcaggtggtggaactg
gggccggtcaacgccaccatccacaaggtcaacgaatgtgtcaacgccgcggatctgcag
ctgctgagccgcatgtatcaacgcatcatggagcaattggtcgcatga
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