Serratia marcescens subsp. marcescens Db11: SMDB11_2946
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Entry
SMDB11_2946 CDS
T03985
Symbol
sdeD
Name
(GenBank) multidrug efflux pump
KO
K07788
multidrug efflux pump
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SMDB11_2946 (sdeD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smac02000
]
SMDB11_2946 (sdeD)
Transporters [BR:
smac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SMDB11_2946 (sdeD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Man-6-P_recep
Motif
Other DBs
NCBI-ProteinID:
CDG13511
LinkDB
All DBs
Position
3108790..3111909
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AA seq
1039 aa
AA seq
DB search
MQVMPPNAGGGPSRLFILRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLY
PGASPDVVTSAITAPLERQFGQMSGLKQMASQSSGGASVVTLQFQLALPLDVAEQEVQAA
INSATNLLPTDLPYPPIYSKVNPADPPILTLAVTSTAMPMTQVEDMVETRVAQKISQVTG
VGLVTLAGGQRPAVRVKLNAAAVAAYGLNSETIRAAISNANVNSAKGSLDGPTRSVTLSA
NDQMKSADDYRQLIVAYQNGAAIRLQDIATIEQGAENTRLAAWANKQQAIVLNIQRQPGV
NVITTADSIREMLPTLIKSLPKSVDVKVLTDRTTTIRASVSDVQFELLLAIALVVMVIYV
FLRNVPATIIPSVAVPLSLVGTFAAMYFLGFSINNLTLMALTIATGFVVDDAIVVIENIS
RYIEKGEKPLDAALKGAGEIGFTIISLTFSLVAVLIPLLFMGDIVGRLFREFAVTLAVAI
LISAVVSLTLTPMMCARMLSHESLRKQNRFSAASERFFDRVIAQYGKWLKTVLNHPWLTL
GVAVGTLALTVLLYLLIPKGFFPVQDNGIIQGTLEAPQSVSFSNMAERQQQVAAQILKDP
AVESLTSFVGVDGSNATLNSGRLQINLKPLSERSERIPAIISRLQQQTAQFPGVKLYLQP
VQDLTIDTQVSRTQYQFTLQAMSLDDLSLWVPQLMDELKQTPQLADVTSDWQDQGLVAYV
NVDRDSASRLGVTMSDVDNALYNAFGQRLISTIYTQANQYRVVLEHDVSATPGLAALNEI
RLSGNDGAVVPLSAIAKIEERFGPLSVNHLDQFPSATVSFNVADGYSLGEAVDAVTQAEK
NLNMPRDITTQFQGATLAFQAALGSTLWLILAAVVAMYIVLGVLYESFIHPVTILSTLPT
AGVGALLALMLAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGLSPRDAIYQA
CLLRFRPILMTTLAALLGALPLMLSTGVGAELRHPLGVCMVGGLIMSQILTLFTTPVIYL
LFDKLARNTHRQLDTQELP
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgatgcctcccaacgccggcggcggtccgtcccgcctgtttattctgcgcccg
gtcgccaccacgctgctgatggtggcaatattgctagcggggattatcggttatcgcgcg
ctgccggtgtccgccctgccggaggtggattaccccactatccaggtggtgacgctgtac
cccggcgccagcccggacgtggtgacctccgccattaccgcgccgctggaacgccagttc
ggccagatgtccggcctgaagcaaatggcgtcgcaaagctccggcggcgcctcggtggtc
acactgcagttccagttggcgctgccgctcgacgtcgcggagcaggaagtgcaggcggcg
atcaactccgccaccaacctgctgccgaccgatttgccttacccgccgatctacagcaag
gttaaccccgccgatccgccgatcctgacgctggccgtgacctccaccgccatgccgatg
acgcaggtggaagacatggtggaaacccgcgtggcgcaaaaaatttctcaggtgaccggc
gtcggcctggtgacgctggccggcggccaacgcccggcagtgcgcgtaaaattgaacgcg
gcggcggtcgccgcctatggcctgaacagtgaaaccattcgcgccgccatcagcaacgcc
aacgtcaactcggcgaaaggcagccttgacggcccgacccgatcggtcaccctctccgcc
aacgaccaaatgaaatctgccgacgactatcgccagctgatcgtcgcctatcagaacggc
gcggcgatccgcctgcaggatatcgccaccatcgaacaaggggcggaaaatacccgactg
gcggcctgggccaacaagcaacaggcgatcgtgctgaacatccaacgccagcccggcgtc
aacgtcatcaccaccgccgacagcatccgcgaaatgctgccgacgctgattaaaagcctg
cccaagtcagtcgacgtcaaggtgttgaccgatcgcaccaccaccatccgcgcctcggtc
agcgacgtgcagttcgagctgctgctggcgatcgcgctggtggtgatggtgatctacgtg
ttcctgcgcaacgtgccggcgaccattatccccagcgtggcggtgccgctgtcgctggtg
ggcaccttcgccgccatgtacttccttggcttctccatcaacaacctgacgctgatggcg
ctgaccatcgccaccggcttcgtggtggacgacgccatcgtggtgatcgagaacatctcg
cgctacatcgagaaaggggaaaaaccgctcgacgccgcgttgaaaggggccggcgagatc
ggtttcaccatcatctctctgaccttctcgctggtggcggtgctgatcccgctgctgttc
atgggcgacatcgtcggccgcctgttccgcgagttcgccgtcacgctggcggtggcaatt
ttgatctccgccgtggtgtcgctgacgctgacgccgatgatgtgcgcacgcatgctcagc
cacgaatcgctgcgcaagcagaaccgtttttccgccgcctccgaacgctttttcgaccgg
gtgatcgcgcaatatggcaagtggctgaaaacggtgcttaaccatccctggctgacgctc
ggcgtggccgtgggcacgctggcgctgacggtattgctgtacctgctgatcccgaaaggt
ttcttcccggtgcaggacaacggcatcattcagggcacgctggaggcgccgcagagcgtc
tcgttcagcaacatggccgagcgccagcagcaggtcgcggcgcagatcctcaaagatccg
gcggtggagagcctgacctcgttcgtcggcgtcgacggcagcaacgccacgctcaacagc
ggccggctgcagatcaacctgaagccgctgagcgaacgcagcgagcgcattccggcgatc
atcagccgcctgcagcagcaaacggcgcagttccccggcgtgaaactgtatctgcaaccg
gtgcaggatctgaccatcgatacccaggtcagccgcacccagtaccagttcaccctgcag
gcgatgtcgctggacgatctcagcctgtgggtgccgcagctgatggatgagctgaagcaa
accccgcagctggcggacgtcaccagcgactggcaggatcaggggctggtcgcctatgtc
aacgtcgatcgcgattcggcctcccgcctcggcgtcaccatgagcgacgtggacaatgcg
ctgtacaacgcgttcggccagcgcctgatctccaccatctacacccaggccaaccaatac
cgcgtggtgctggagcacgacgtcagcgcgacaccggggttggcggcgctcaatgagatc
cgtctgagcggcaacgacggcgccgtggtgccgctgagcgccatcgccaaaatcgaagag
cgcttcggcccgctgtcggtgaaccatctcgaccagttcccgtcggccaccgtttcgttc
aacgtcgccgacggctactcgctcggcgaggcggtcgacgcggtcacccaggcggaaaaa
aatctcaatatgccaagggacatcaccacccaattccagggggcgaccctggccttccag
gcggcgctcggcagcacgctgtggctgattttggcggcggtggtggcgatgtacatcgtg
ctgggcgtgctgtatgaaagcttcattcatccggtcaccatcctctccaccctgccgacc
gccggggtcggcgccctgttggcgctgatgttggccggcagcgagctggacgtgatcgcc
atcatcggcatcatcctgctgatcggcattgtgaagaagaacgccatcatgatgatcgac
ttcgcgctggcggcggaacgcgagcagggtttatcgccgcgcgacgccatctatcaggcc
tgtctgctgcgtttccggccgatcttgatgaccacgctggcggccttgctcggcgcgctg
ccgctgatgctgagcaccggcgtcggcgcggagctgcggcatccgctcggcgtctgtatg
gtcggcggtttgatcatgagccagatcctgacgctgttcaccacgccggtgatctacctg
ctgtttgacaagctggcgcgcaacacgcatcgccagctggatacgcaggagctgccgtga
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