Serratia marcescens subsp. marcescens Db11: SMDB11_3008
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Entry
SMDB11_3008 CDS
T03985
Symbol
ndk
Name
(GenBank) multifunctional nucleoside diphosphatekinaseand apyrimidinic endonuclease and3'-phosphodiesterase
KO
K00940
nucleoside-diphosphate kinase [EC:
2.7.4.6
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00230
Purine metabolism
smac00240
Pyrimidine metabolism
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01232
Nucleotide metabolism
smac01240
Biosynthesis of cofactors
Module
smac_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
smac_M00050
Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
smac_M00052
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
smac_M00053
Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
smac_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SMDB11_3008 (ndk)
00240 Pyrimidine metabolism
SMDB11_3008 (ndk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smac04131
]
SMDB11_3008 (ndk)
Enzymes [BR:
smac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.6 nucleoside-diphosphate kinase
SMDB11_3008 (ndk)
Membrane trafficking [BR:
smac04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
SMDB11_3008 (ndk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NDK
Motif
Other DBs
NCBI-ProteinID:
CDG13574
UniProt:
A0ABC9IL81
LinkDB
All DBs
Position
complement(3179281..3179706)
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AA seq
141 aa
AA seq
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MTVERTFSIVKPNAVANNDIGAIYARFERAGFKIIAAKMLRLTREQAEGFYAEHKGRPFF
DGLVEFMTSGPIMVQVLESENAVQRNRDIMGATNPDNALAGTLRADYADSFTANAVHGSD
SVESAQREIAYFFNESEICAR
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtagaacgtaccttttccatcgttaaaccaaacgcagtagccaacaacgacatc
ggcgctatctacgcgcgtttcgagcgcgccggtttcaaaatcatcgccgctaaaatgctg
cgtctgactcgcgaacaagctgaaggcttctacgctgagcacaaaggccgcccattcttc
gacggtctggttgagttcatgacctccggcccgatcatggtgcaggttctggaatctgaa
aacgccgtgcagcgcaaccgcgacatcatgggcgcaaccaacccggacaacgcactggcc
ggcaccctgcgcgccgactacgcggacagcttcaccgctaacgccgttcacggttccgac
tctgttgaatccgcacagcgcgaaatcgcttacttcttcaacgaaagcgaaatctgcgca
cgttaa
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