Serratia marcescens subsp. marcescens Db11: SMDB11_3026
Help
Entry
SMDB11_3026 CDS
T03985
Symbol
glyA
Name
(GenBank) serine hydroxymethyl transferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00260
Glycine, serine and threonine metabolism
smac00460
Cyanoamino acid metabolism
smac00630
Glyoxylate and dicarboxylate metabolism
smac00670
One carbon pool by folate
smac00680
Methane metabolism
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01120
Microbial metabolism in diverse environments
smac01200
Carbon metabolism
smac01230
Biosynthesis of amino acids
smac01240
Biosynthesis of cofactors
smac04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SMDB11_3026 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SMDB11_3026 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SMDB11_3026 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SMDB11_3026 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SMDB11_3026 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SMDB11_3026 (glyA)
Enzymes [BR:
smac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SMDB11_3026 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CDG13591
LinkDB
All DBs
Position
complement(3194204..3195457)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKREMNIADYDAELWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVVPYGIDDKGQIDYDDLAKQAQTHKPKMIIGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAVNAKAMVD
VFLQRGYKVVSGGTHNHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGTPAVTRRGFKEADVRELAGWICDVLDNINDEATIERTKKKVLDICARLPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattacgatgcggaactgtggcgtgccatggag
caggaagtggtgcgtcaggaagagcacatcgagctgatcgcgtctgagaactacaccagc
ccgcgcgtgatgcaggctcagggttcccagctgaccaacaaatacgctgaaggctatccg
ggcaagcgttactacggcggctgcgaatacgtggatatcgttgagcagctggctatcgat
cgtgccaaagaattgttcggcgccgattacgccaacgtgcagccgcactccggctcccag
gctaacttcgccgtgtacaccgcgctgctgcagccgggcgacaccattctgggcatgaac
ctggcgcacggcggccacctgacccacggttccccggttaacctgtccggcaaactgtat
aacgtggtgccttacggcatcgacgacaaaggccaaatcgactatgacgatctggccaaa
caggcgcaaacccacaagccgaaaatgatcatcggcggcttctccgcttactccggcgtg
gttgactgggccaaaatgcgcgaaatcgccgacagcatcggcgcttacctgttcgtcgac
atggcgcacgtggccggcctgatcgccgccggcgtgtacccgaacccggtaccgcacgcg
cacatcgtcactaccaccacccacaaaaccctggcgggtccgcgcggcggcctgatcctg
gcgaagggcggcgacgaagagctgtacaagaagctgaactccgccgtgttccctggtggc
cagggcggcccgctgatgcacgtgatcgccggcaaggcggtggcgctgaaagaagcgatg
gagcctgagttcaaggtttaccagcagcaagtggcggtcaacgccaaggcgatggtggac
gtgttcctgcagcgcggctacaaagtggtctccggcggcacccataaccacctgttcctg
ctggatctggtcgataaaaacctgaccggtaaagaagcggacgccgccctgggccgcgcc
aacatcaccgtcaacaaaaacagcgtgccgaacgatccgaagagcccgttcgtcacctcc
ggcgtgcgtatcggcaccccggccgtcacccgtcgcggcttcaaagaagccgacgtgcgc
gaactggccggttggatctgtgatgtgctggacaacatcaacgatgaagccaccatcgaa
cgcaccaagaagaaagtgctggatatctgcgcccgcctgccggtttacgcataa
DBGET
integrated database retrieval system
