Serratia marcescens subsp. marcescens Db11: SMDB11_3054
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Entry
SMDB11_3054 CDS
T03985
Symbol
recO
Name
(GenBank) gap repair protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SMDB11_3054 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_3054 (recO)
DNA repair and recombination proteins [BR:
smac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SMDB11_3054 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SMDB11_3054 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
CDG13619
UniProt:
A0ABC9ILD3
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All DBs
Position
complement(3229666..3230397)
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AA seq
243 aa
AA seq
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MDGWERAFVLHGRPYSETSLMLDLFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRW
GGRGEVKTLRNAEAVSLGLPLSGMMLYSGLYVNELLARVLEQETNYSVLFFDYLQCLQAL
AAEDSSPEQALRQFELALLHHLGYGLDFLHCAGSGLPVDDAMTYRYREEKGFIASLVVDH
YSFTGRELRALAERQFPDAETLRAAKRFTRMALKPYLGGKPLKSRELFRQFVRKQPNTPV
DDA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtggacggctgggagcgcgctttcgtcctgcatgggcggccgtacagtgaaaccagtctg
atgctggatctgtttaccgaaggtcatgggcgggtgcgcttgctggcgaaaggcgcgcgc
agccgccgctccaatctgaagggttgcctgcagccctttacccccctgttagtgcgctgg
ggcgggcgtggcgaagtgaaaacgctgcgcaacgccgaagcggtctcccttggtttaccc
ctcagcggcatgatgctctacagcggcctgtatgtgaacgagctgctggcgcgcgtgctg
gagcaggaaaccaactactcggtgctgttcttcgactacctgcaatgcctgcaggcgctg
gcggcggaagacagttcgccggaacaggcgctgcgtcagttcgagctggccctgttgcac
cacctgggttacggcctcgatttcctgcactgcgccggcagcggcctgccggtggatgat
gccatgacctaccgctaccgcgaagagaagggctttatcgccagcctggtggtggatcac
tacagcttcactgggcgcgaactgcgcgcgttggcggagcgtcagtttcccgatgccgag
acgctgcgcgccgccaagcgtttcacccgcatggcgctgaaaccctacctcggcggcaag
ccgttgaagagccgcgaactgttccgccagtttgtgcgcaaacagccgaatacgccggtc
gacgacgcctga
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