Serratia marcescens subsp. marcescens Db11: SMDB11_3161
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Entry
SMDB11_3161 CDS
T03985
Symbol
ldcC
Name
(GenBank) lysine decarboxylase 2, constitutive
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00310
Lysine degradation
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SMDB11_3161 (ldcC)
Enzymes [BR:
smac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SMDB11_3161 (ldcC)
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
CDG13726
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Position
complement(3338375..3340516)
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AA seq
713 aa
AA seq
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MNIIAIMGPTGVYYKDEPIRELHAALATMGFQLVYPKNSGDLLKLIEANARICGVIFDWD
DYSLELCSEINELNEYLPLYAFINTHSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQY
TAEYIDTITPPLTKALFNYVREGKYTFCTPGHMAGTAFQKSPVGCLFYDFFGANTLKADI
SISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQREFTRASIAARVQETPNATWPVH
AVITNSTYDGLLYNTDYIKQTLAVPSIHFDSAWVPYTNFHPIYDGKSGMSGDRVPGKVIY
ETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTSPHYGIVASMETAAAMLRGNP
GRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLDPDDNWHGFGQTD
RDHMYLDPIKVTILTPGMNELGALEEEGIPAALVAKYLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMSLLRGLTDFKRAYDLNLRVKNMLPDLYAEDPDFYRHMRIQDLAAGIHRLIRQH
DLPRLMQRAFDVLPEMKLTPHQMFQEQVRGNVETCELDQLVGKVAANMILPYPPGVPLVM
PGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGRYLVKVLKAPA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcgccatcatgggcccgacgggcgtctactacaaagatgagccgatccgc
gagctccacgctgcgctggccaccatgggattccaactggtgtaccccaaaaacagcggt
gacctgctgaagctgatcgaagccaatgcccgcatctgtggggtgatcttcgactgggac
gactacagcctggagctgtgcagcgagatcaacgagctgaacgaatacctaccgctgtac
gcctttatcaatacccactccaccttcgacgtcagcctgcatgaaatgcgcatggtgctc
tatttcttcgagtatggcctgaatgcggcggacgatatcgcgcagcgcatccagcagtac
accgcagaatatattgataccattacgccgccgctgaccaaggcgctgttcaactacgtg
cgtgaagggaagtacaccttctgcacgccgggccacatggccggtaccgcgttccaaaaa
agcccggtgggctgcctgttctatgactttttcggcgccaataccctgaaggccgacatt
tcgatttcggtcaccgagctcggctcgctgttggatcacaccgggccgcacctcgaggcc
gaagagtatattgcgcgtactttcaacgccgagcagagctatctggttaccaacggcacc
tccaccgccaacaagatcgtcggcatgtattcggcgccggcgggcagcacggtgctgatc
gaccgcaactgccacaaatcgctgtgccacttgctgatgatgagcgatatcgttccgatc
tatctgcgcccgctgcgcaacgcctacggcatccttggcggcattccgcagcgcgagttc
acccgcgccagcatcgccgctcgggtgcaggagaccccgaacgccacctggccggtgcat
gcggtgatcaccaattccacctatgacggcctgctgtataacaccgactacatcaagcag
acgctggcagtgccgtcgatccacttcgactccgcctgggtgccttacaccaacttccat
ccgatttacgacggcaagagcggcatgagcggcgatcgggtgcccggaaaggtcatctac
gaaacccagtctacacataaactgctggcggccttctctcaggcctcgatgattcatatc
aagggcgactacgacgagagcaccttcaatgaagcctacatgatgcacaccaccacctcg
ccgcactatggcattgtggcatcgatggagaccgccgccgccatgctgcgcggcaacccg
gggcgccgcttgatcaatcgatcggtggagcgcgcgctgcattttcgccgtgaagtgcag
cggctgcgcgaggagagcgacagttggttctttgacatttggcagccggaggagatcgat
gaggcgcagtgttggccattggatcctgacgataactggcacggcttcggccagaccgat
cgcgatcacatgtacctcgatccgatcaaggtgacgatcctgacgccgggcatgaatgag
ctgggggcgctggaggaagaggggatcccggcggcgctggtggcgaagtatctcgacgag
cgcggcatcgtggtggagaagaccgggccgtacaacctgctgttcctgttcagcatcggc
atcgacaaaaccaaggcgatgagcctgttgcgcggcctgactgatttcaagcgcgcctac
gatctcaacctgcgggtgaagaacatgctgccggatctgtacgccgaggatccggatttt
tatcgccatatgcgtatccaggatctggccgccggcattcatcggctgatccgccaacac
gatctgccgcgcctgatgcagcgggcgttcgacgtgctgcctgaaatgaagctgacgccg
caccagatgttccaggagcaggtgcgcggcaatgtggaaacctgcgagctggatcagttg
gtgggcaaggtggcggccaatatgatcctgccttatccgccgggcgtgccgctggtgatg
ccgggagaaatgatcaccgaagagagccgggcggtgctcgatttcctgctgatgctgtgc
tctatcggtgagcgctatcccggttttgaaaccgacatccacggcgccaaactgacggag
gacgggcgctatctggtgaaggtgttgaaagcgccagcataa
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