Serratia marcescens subsp. marcescens Db11: SMDB11_3209
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Entry
SMDB11_3209 CDS
T03985
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SMDB11_3209 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_3209 (recC)
Enzymes [BR:
smac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SMDB11_3209 (recC)
DNA repair and recombination proteins [BR:
smac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SMDB11_3209 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CDG13771
LinkDB
All DBs
Position
complement(3400700..3404071)
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AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKTLTSALIARDPLADPFQQEVVLVQSPGMAQWLQMQLAEQFGIAANV
AFPLPATFIWDMFTRVLPDIPKESAFSKDAMTWKLMWLLPEMLIQPAFAPLQHYLTDDGD
KRKIHQLAGRVADLFDQYLVYRPQWLESWQRGERIDGLAEAQQWQAPLWARLVEYTRELG
QPEWHRANLYSRFIHALEQATTCPPGLPPRVFICGISALPPVYLEALQALGRHIDIHLMF
TNPCRYYWGDIQDYAFLARLQSRKRRHYHQAREQGLFREPDDAARLFDAEGQQQLSNPLL
ASWGKLGRDHLYLLSQMEGAQEVDAFVDIPADTMLHAVQRDMLELEDHAVIGITAETLES
SVSKRPLDENDRSLSLHACHSPQREVEVLHDQLLTMLAQDPSLTPRDIIVMVADIDSYTP
YIQAVFGNAPAERYLPFAISDRKARQAHPALQAFISLLDLPQSRFTSEQVLALLEVPALA
TRFAIGEEGLRLLRHWVGESGVRWGLDDDNVRELDLPATGQHTWRFGITRMLLGYAMDSN
AGDWQGILPYDESSGLAAELAGQLADLLAQLSHWRQVLSEARPLEAWLPLCRQLLDAFFA
ADSDTEVVLALIEQQWQQAINFGLAARYPDEVPLTILRDDLAARLDQERISQRFLAGQIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAQQVKRGDRSRRDDDRYLFLEAI
LSAQQRLYISFIGRSIQDNSPRYPSVLVTELLEYLEQSYCLPGDEELSADDSARRVGEHL
LKWHARMPFAAENFLPGSEAQSYAAEWLPAADGRGAAHPAFNQPLPAEALQQIALDELLR
FYRHPIRAFFQLRLGVSFILEETELPDEEPFTLDNLSRYQFNSQMLNTLIDGDDPERLFQ
RVRAAGGLPYGAFGEIYWQKQQEEMSELAEQVRAERAQSHSLELDIDIAGVRLSGWLHQV
QDDGLLRWRPATLSAVDGILLWLEHLVYCCAGGTGESRMYGRKNSAWRFAALAPEEAQAQ
LAELLAGYQRGLCEPLLLLNKSGWAWLSQCYLPETQQIDWEEDAQIKARAKLLQAWQGDQ
RIPGEGEDPYVQRVFRQLDNEYLAQILAETERYLLPVARHNLG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattccaatcagctggatttattgaagacgctgaccagcgcgctg
atagccagagatccgttggccgatccttttcaacaggaagtggtgctggtgcagagcccc
gggatggcgcaatggctgcagatgcagctggcggaacagttcggcatcgccgccaatgtc
gcgtttccgctgccggcgacctttatttgggacatgttcacccgggtgctgccggatatc
ccgaaagagagcgccttcagcaaggacgccatgacctggaagctgatgtggttgctgcca
gagatgctgatccaaccggcgtttgcgccgctacagcactatctgaccgatgacggcgac
aagcgcaaaattcatcagctggccggccgggtcgccgacctgttcgaccaatatttggtt
tatcgcccgcagtggctggagagttggcagcgcggtgagcgcatcgacggtctggcggag
gctcagcagtggcaggcgccgctctgggcgcggctggtggagtacacgcgtgagctgggg
cagccggaatggcaccgcgctaatctgtacagccgctttatccacgcgctggagcaggca
acaacgtgcccgcccggtttgccgccgcgggtgtttatctgcggcatctcggcgttgccg
ccggtttatttggaggcgctgcaggcgctggggcggcatatcgatatccacctgatgttc
accaacccctgtcgttattactggggcgacattcaggattacgctttcctggcccgcttg
cagagccgtaaacgccgtcactaccaccaggctcgtgagcaggggctgttccgcgagccg
gatgacgcggcgcgcctgtttgacgccgaaggccagcagcagctcagcaacccgctgttg
gcctcctggggcaagctggggcgcgatcacctctatctgctgtcgcagatggaaggggcg
caagaggtcgacgcctttgtcgatatcccggcggataccatgctgcacgccgttcagcgc
gacatgctggagttggaagatcatgcggtgatcggtattaccgcggaaacgctggaaagc
agcgtcagcaaacgcccgcttgatgagaatgaccgctccctcagcctgcacgcctgccac
agcccacagcgggaagtggaggtgctgcacgatcaactgctgaccatgctggcgcaggat
ccgtcgttgacaccgcgcgacatcatcgtgatggtagcggatatcgacagctacacgcct
tatattcaggctgtgttcggcaacgcccccgccgagcgctacctgccgttcgccatttct
gaccgtaaagcgcggcaggcgcatccggcgctgcaggcgttcatttcactgctcgatttg
ccgcaaagccgctttacctcggaacaggtgctggcgctgctggaggtgcctgccctggct
acccgtttcgccatcggcgaagaggggctgcgcctgctgcgtcactgggttggtgaatcc
ggcgttcgctggggcctggacgacgataacgtgcgcgaactggatctgcccgccactggc
cagcatacctggcgcttcggcattacgcgcatgctgcttggctacgcgatggacagcaat
gccggcgattggcagggcattttaccttacgacgaatcgagcgggttggccgccgagttg
gcggggcagttggcagacctgctggcgcagctcagccactggcggcaagtcttgagcgaa
gcgcgcccgctcgaggcgtggctgccgttgtgccggcaactgctggatgccttcttcgcc
gcggatagtgacaccgaagtcgtgctggcgctgatcgaacagcagtggcagcaggccatc
aattttggcctggcggcgcgctatcccgacgaggtgccgttgaccattctgcgtgacgat
ctggcggcgcgcctcgatcaggaacgcatcagtcagcgcttcctcgccgggcaaatcaac
ttctgtacgctgatgccgatgcgttccattccgttcaaggtggtgtgcctgctgggcatg
aacgacggcgtgtatccgcgcacgctgccgccgctggggttcgatctgatggcgcagcag
gtcaaacgtggcgaccgtagccgtcgcgatgacgaccgctatctgttcctggaagcgatt
ttgtccgctcagcagcggctgtatatcagcttcatcggccgttccattcaggacaacagc
ccgcgctatccttcggtgctggtcaccgagctgctggagtacctggagcaaagctattgt
ctgccgggagacgaggaacttagtgcagacgacagcgcccgccgagtgggcgagcacttg
ctgaaatggcatgcgcgcatgccgttcgccgccgagaatttcttgccgggctcggaggcg
caaagctatgccgccgagtggctgcccgccgccgatggtcgcggtgcggcgcatccggcg
ttcaaccagccgctgcccgccgaagcgctgcagcaaatagcgttggatgagctgctgcgg
ttttatcgccatccgattcgtgccttcttccagctgcgcttgggcgtcagttttatcctg
gaagagaccgagttgccggacgaagaacccttcacgctggataacctcagccgttaccag
ttcaacagtcaaatgctgaatacgcttatcgacggcgacgatcccgagcggctattccag
cgggtgcgcgccgccggtgggttgccctatggcgccttcggcgaaatttattggcaaaag
cagcaggaagaaatgagcgaactggccgagcaggtgcgtgcggaacgggcgcagagccat
agcctggagctggatatcgatatcgccggcgtgcgcctcagtggctggctgcaccaggtg
caggatgacggcctgttgcgctggcggcccgctacgctgtcggcggtggacggcatattg
ttgtggctggagcacctggtgtattgctgtgccggcggcaccggcgagagccgcatgtat
ggccgcaagaactccgcctggcgctttgccgcgctggcgccagaagaggcgcaggcacag
ttggcggagctgctggcgggctatcaacgcggtctgtgtgagccgctgctgttgctgaac
aagagcggctgggcgtggctgagccagtgctatctgccggaaacgcagcaaatcgactgg
gaggaagacgcgcaaattaaggcccgagccaaattgctgcaggcctggcagggcgaccag
cgcattcccggagaaggggaagatccctacgtgcagcgagtattccgccaattggataat
gaatacttggcgcaaattctggccgaaacagagcgttatctgctgccggtggcgcggcat
aacctggggtaa
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