Serratia marcescens subsp. marcescens Db11: SMDB11_3217
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Entry
SMDB11_3217 CDS
T03985
Symbol
nudH
Name
(GenBank) nucleoside hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMDB11_3217 (nudH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smac03019
]
SMDB11_3217 (nudH)
Messenger RNA biogenesis [BR:
smac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SMDB11_3217 (nudH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
CDG13779
UniProt:
A0ABC9ILT7
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All DBs
Position
complement(3410299..3410826)
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
SKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLLCNDADINMQRSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFAVTVMPMQEQAAPRQAPAYRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaatcgtcagggg
caggtcttatgggcccgccgttacggtcagcactcctggcagtttccccaaggtgggatt
aaccctggcgaaactgcggagcaggcgatgtaccgtgagctgttcgaagaagtggggctg
agtaaaaaggatgtgcgcatcctggcttcgacccgcaactggttgcgctataaattgccg
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccaaaagcaaaaatggttt
ttgttgcagctactgtgcaatgacgctgatatcaatatgcagcgcagcagcacgccggag
ttcgacggttggcgctgggtgagcttctggtatccggtgcgccaggtggtgtcgttcaaa
cgcgacgtttaccgccgggtgatgaaagaattcgccgtgaccgtgatgccgatgcaagag
caggcggcgccgcggcaggcccccgcttatcgccgaaagagaggttaa
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