Serratia marcescens subsp. marcescens Db11: SMDB11_3279
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Entry
SMDB11_3279 CDS
T03985
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase
KO
K04763
integrase/recombinase XerD
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smac03036
]
SMDB11_3279 (xerD)
Chromosome and associated proteins [BR:
smac03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SMDB11_3279 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF5098
Motif
Other DBs
NCBI-ProteinID:
CDG13843
UniProt:
A0ABC9IMA6
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Position
complement(3480506..3481405)
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AA seq
299 aa
AA seq
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MQQQDNALIEQFLDALWLERNLAENTLASYRLDLQALGAWLGQQNTTLLQAQALDLQAFL
AERVDGGYKATSSARLLSAMRRLFQYLYREKLRADDPTAQLASPKLPQRLPKDLSEAQVD
ALLQAPCVDQPLELRDKAMLEVLYATGLRVSELVGLSISDVSLRQGVVRVIGKGNKERLV
PLGEEAVYWIENYLEHGRPWLVNGQTLDVLFPSTRCQQMTRQTFWHRIKHYAILAGIDSE
RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacagcaagacaatgcgctgattgaacaattcctggatgcgctgtggcttgagcgc
aatctggcggaaaatacgctggcctcctaccggctggatttgcaggccctgggcgcctgg
cttggccagcaaaataccaccttgctgcaggcgcaggcgttggatttgcaggcgtttctc
gccgagcgggtggacggcggctacaaggccaccagctccgcgcgtttgttgagcgccatg
aggcgcctgtttcaatatctgtaccgcgagaagctgcgcgccgacgatcccaccgcgcaa
ctggcgtctcccaagttgccgcagcgtttgccgaaggatctgagcgaggcgcaggtcgat
gcgctgttgcaggcgccctgcgtcgatcaaccgctggagctgcgcgacaaggcgatgctc
gaagtgttgtacgccaccgggctgcgggtttccgagctggtggggttgagcatcagcgac
gtcagcctgcgccagggcgtggtgcgggtgatcggcaagggcaacaaggagcggctggtg
ccgctgggcgaagaggcggtctactggatcgaaaattacctggagcacggccgcccatgg
ctggtcaatggccagacgctggatgtgctgttccccagcacccgctgccagcaaatgacc
cgacagacgttctggcatcgcatcaaacactatgccatccttgcgggcatcgacagcgag
cgtctgtcgccgcacgtgttgcggcacgcgttcgccacccatttgctgaaccatggggcc
gatctccgtgtcgtacagatgttgttagggcacagcgatctctcgaccacgcaaatttat
acacatgtagcgaccgaacgactgaaacagctacatcaacagcatcacccgcgcgcctga
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