Serratia marcescens subsp. marcescens Db11: SMDB11_3399
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Entry
SMDB11_3399 CDS
T03985
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMDB11_3399 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smac03019
]
SMDB11_3399 (pcnB)
Enzymes [BR:
smac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SMDB11_3399 (pcnB)
Messenger RNA biogenesis [BR:
smac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SMDB11_3399 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CDG13964
UniProt:
A0ABC9IMI4
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All DBs
Position
3611347..3612663
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AA seq
438 aa
AA seq
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MTVIPREQHSISRKDISENALKVLYRLNKSGYEAYLVGGGVRDLLLGKKPKDFDITTNAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQNQESDKNSSQQAQNGMLLR
DNIFGSIEEDAQRRDFTINSLYYGVADFTLRDYVGGLNDLKQGVIRLIGDPETRYREDPV
RMLRAVRFAAKLDMRISEETAEPIPRLASLLHEIPPARLFEESLKLLQAGYGFQTYLKLC
EYQLFQPLFPLIARNFTPNHDTPMERILAQVLKNTDHRLQNDMRVNPAFLFAAMLWYPLL
EHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGKR
AHKLMEHPKFRAAYDLLALRAEVEDNQEMLRLAEWWGEFQDATPARQKAMLSTLGDDPAP
RRARQRRPRRRAPRKEGA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcccgcgcgaacagcactcgatctcccgtaaagacatcagcgaaaatgcg
ctgaaagtgctttatcgcctgaacaagtccggctacgaggcctatctggtcggcggcggg
gtgcgcgatctgttgctcggcaaaaagccgaaagacttcgacatcaccaccaacgccacg
ccggagcaagtgcgcaagctgttccgcaactgccgcctggtcggccgccgtttccgcttg
gcgcacgtgatgttcgggccggagatcatcgaagtggccaccttccgcggtcaccacgaa
cagaatcaggaatccgacaagaactcgtctcagcaggcgcaaaacggcatgctgctgcgc
gacaacatcttcggttcgatcgaggaggacgcccagcgccgtgatttcaccatcaacagc
ctgtactacggcgtggcggatttcaccctgcgcgattacgtcggcggcctgaacgatctg
aagcaaggcgtgatccgcctgattggcgatccagaaacccgctaccgcgaagatccggtg
cgcatgctgcgcgcggtgcgcttcgccgccaagctggatatgcgcatcagcgaagagacc
gccgagccgatcccgcgcctggcctcgctgctgcacgagatcccgccggcgcgcctgttc
gaagaatccctcaagctgctgcaggcgggttacggtttccagacctacctgaagctgtgc
gaataccagctgttccaaccgctgttcccgctgatcgcccgcaacttcacgccgaaccac
gatacgccgatggagcgcattctggcgcaggtgctgaagaacaccgatcaccgtctgcag
aacgacatgcgcgtcaacccagccttcctgtttgccgccatgctgtggtacccgctgctg
gagcacgcgcagaagctggcgcaggaaagcggcctggcgtactacgacgccttcgcgctg
gcgatgaacgacgtactcgacgagcagtgccgctcgctggcgatcccgaaacgcatcacc
acgctggtgcgcgatatctggcagctgcagctgcgcctgtcccgccgtcagggcaaacgc
gcgcacaaactgatggaacatccgaaattccgcgccgcctatgatttgctggcgctgcgt
gcggaagtggaagacaatcaggagatgctgcgtctggccgagtggtggggtgagttccag
gacgccacgccggcgcggcagaaagccatgctgagcaccctgggtgacgatccggcgccg
cgccgcgcgcgtcaacgccgccctcgtcgccgggcaccgcgtaaagaaggggcataa
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