Serratia marcescens subsp. marcescens Db11: SMDB11_3420
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Entry
SMDB11_3420 CDS
T03985
Symbol
pdhR
Name
(GenBank) pyruvate dehydrogenase complex repressor
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_3420 (pdhR)
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SMDB11_3420 (pdhR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR
MarR_2
TrmB
HTH_11
PaaX
HTH_24
HTH_28
HTH_DeoR
HTH_41
Fe_dep_repress
HTH_Crp_2
HTH_36
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CDG13985
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Position
complement(3636375..3637139)
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AA seq
254 aa
AA seq
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MAYSKIRQPKLSDVIEQQLEYLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEA
KGLLLRRQGGGTFVQTNLWQSFSDPLAELLADHPESQFDLLETRHALEGIAAYYAALRGT
DEDLARIRDCHIVIQQAQDSGDLDAEADAVMQYQIAVTEAAHNVVLLHLLRCMGPMLEQN
VRQNFELLYSRREMLAKVSSHRAGIFEAIVAREPEKAREASHRHLAFIEEILLDLSREHT
RRERSLRRLQQRKD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcctacagcaaaatccgccaacccaagttgtcagatgttatcgagcaacagctcgaa
tacctgatcctcgaggggacactgcgcccaggcgaaaaactgcctccggagcgcgagctg
gcgaaacaatttgatgtctcccgtccttctctgagagaggccattcagcgccttgaagcg
aaagggctgctcctgcgccgtcagggcggcggcaccttcgtgcaaactaatctgtggcag
agcttcagcgatccgctggccgagctgctggccgaccatcccgaatcacagttcgatctg
ctggaaacccgtcacgcgctggaaggcattgccgcctattacgcggcgctgcgcggcacc
gatgaagatctggcgcgcatccgcgattgccacatcgtgattcaacaggctcaagacagc
ggcgatctcgacgccgaggccgatgcggtcatgcagtatcaaatcgccgtgactgaagcc
gctcacaacgttgtgttacttcacctgctacgctgcatggggccgatgctggaacagaac
gtgcgtcagaactttgaattgctctactcgcgccgtgagatgttggcaaaagtgagcagc
caccgcgccggaatttttgaggcgattgtggcacgcgagccggaaaaggcccgtgaagcc
tcgcatcgccacttggcgtttatcgaggaaatcttgctggatctcagccgggagcatact
cggcgcgagagatcgctacggcgtctccagcaacgcaaggattaa
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