Serratia marcescens subsp. marcescens Db11: SMDB11_3427
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Entry
SMDB11_3427 CDS
T03985
Name
(GenBank) AraC-family transcriptional regulator
KO
K05804
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_3427
03036 Chromosome and associated proteins [BR:
smac03036
]
SMDB11_3427
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SMDB11_3427
Chromosome and associated proteins [BR:
smac03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SMDB11_3427
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cass2
GyrI-like
Motif
Other DBs
NCBI-ProteinID:
CDG13992
UniProt:
A0ABC9IMG6
LinkDB
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Position
complement(3645561..3646427)
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AA seq
288 aa
AA seq
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MGTQESHIKELLVWIEDNLTNPLSLDIVSAKSGYTKWYLQRMFKKQTGLSLASYIRARRL
YLAAFALRFTQKSILDISVEYQFDNQQTFSRCFKKHFAESPSVYRHARKQDFSNLVRSLA
ASQPGDIQVERVSIARGQYAFHGKHYAYHLDIEKLDKSHLPQRSALRAQFYTLLGERPTQ
TYSFTQLVPDGERVRVDYTLGVTTDYPLREGVALEPLPEIHGEFCRFRYSGKPVALNDHI
IKIYTQVLPEMGLARGDGPDMTVFSYSLSGKEELYLELQHLVPVVPLH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgcaggaaagtcacatcaaggaattgctggtctggattgaagataacctgacc
aatccgctgtcgttggatatcgtttctgccaagtcaggctacacgaaatggtacctgcag
cgcatgttcaaaaagcagaccggattatcgttagcctcgtatatccgcgctcgccgcctc
tatctcgccgccttcgccttgcgcttcacgcagaagagcattctagacatttcggttgaa
tatcaattcgataatcagcagacattctcgcgctgtttcaaaaagcacttcgccgaatcg
cccagcgtgtatcgccatgcccgcaagcaggacttcagcaatctggtgcgttcgctggcg
gccagccagcccggcgatattcaggtcgaacgcgtcagcatcgccagagggcaatatgcc
tttcacggcaaacattacgcgtaccatctggatatcgagaagctggacaagtcgcacctg
ccgcagcgcagcgcgcttcgggcgcagttctataccttgctgggcgagcgcccgacgcaa
acttattcgtttacccagctggtgccggacggcgagcgggtcagggtcgattataccctg
ggcgtgacgacggactacccgttgcgtgaaggcgtggcgctggagccgctgcctgagatc
cacggcgagttttgccgttttcgctattccggcaagccggtggcgctcaacgaccacatc
attaaaatttacacgcaggtgctacccgaaatggggctggcccgcggtgacgggccggac
atgacggtgttcagctattcgctgagcgggaaagaggagctgtatctggagctgcagcat
ctggtgccggtggtgccgttgcactga
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