Serratia marcescens subsp. marcescens Db11: SMDB11_3674
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Entry
SMDB11_3674 CDS
T03985
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_3674 (fis)
03036 Chromosome and associated proteins [BR:
smac03036
]
SMDB11_3674 (fis)
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_3674 (fis)
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
Other families
SMDB11_3674 (fis)
Chromosome and associated proteins [BR:
smac03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SMDB11_3674 (fis)
DNA repair and recombination proteins [BR:
smac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SMDB11_3674 (fis)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
INT1_R3
DUF3333
Phage_NinH
Cache_WalK
HTH_28
Inhibitor_I24
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CDG14238
UniProt:
A0ABC9INY8
LinkDB
All DBs
Position
3898861..3899157
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AA seq
98 aa
AA seq
DB search
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacgcgtaaattctgacgtactgaccgtttctaccgttaactcacaagat
caggtgactcaaaagcctctgcgtgactcggttaaacaagcactgaagaactattttgct
caactgaacggtcaagacgtaaatgacctgtatgagctggtactggctgaagttgaacag
ccactgttggacatggtgatgcaatacacccgtggcaaccagacccgcgcagccctgatg
atgggcatcaaccgcggcacgctgcgtaagaagctgaaaaaatacggcatgaactga
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