Serratia marcescens subsp. marcescens Db11: SMDB11_3841
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Entry
SMDB11_3841 CDS
T03985
Symbol
nirB
Name
(GenBank) nitrite reductase, large subunit,NAD(P)H-binding
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00910
Nitrogen metabolism
smac01100
Metabolic pathways
smac01120
Microbial metabolism in diverse environments
smac01310
Nitrogen cycle
Module
smac_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
SMDB11_3841 (nirB)
Enzymes [BR:
smac01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
SMDB11_3841 (nirB)
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GFIT
Motif
Pfam:
Pyr_redox_2
Fer2_BFD
NIR_SIR
Pyr_redox
NIR_SIR_ferr
Rubredoxin_C
Pyr_redox_3
GIDA
Lys_Orn_oxgnase
AlaDh_PNT_C
FAD_binding_3
DUF7661
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
CDG14402
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All DBs
Position
4080213..4082762
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AA seq
849 aa
AA seq
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MSRVKLAVVGNGMVGHRFIEDLLDKADKDQFEITVFCEEPRIAYDRVHLSSYFSHHTAEE
LSLVREGFYEKHGVKVLVGERAITINRDEKVIHSNTGRTVYYDKLIMATGSYPWIPPIKG
SDSQDCFVYRTIEDLNAIEACARRSKRGAVVGGGLLGLEAAGALKSLGVETHVIEFAPVL
MAEQLDPMGGDQLRRKIERMGVKVHTGKNTQEIVNGGGTARKTMHFADGSLLEVDFIVFS
TGIRAQDKLARQCGLEVGRRGGIAINDSCQTSDPDVYAIGECAAWRDRTFGLVAPGYKMA
QVAADHLLGRENGFQGADMSAKLKLLGVDVGGIGDAHGRTEGARSYVYLDESKEVYKRIV
VSADNKTLLGAVLVGDTSDYGNLLQLALNGIELPENPDGLILPAHAGSKPAIGVDSLPES
AQICSCFDVSKGDIIQAVNKGCHTVAALKAETKAGTGCGGCIPLLTQVLNAELSKQGIEV
NHHLCEHFAYSRQELFHLIRVEGIKSFEALLAKYGKGYGCEVCKPTVGSLLASCWNEYIL
KPQHTPLQDTNDNFLGNIQKDGTYSVIPRSAGGEITPDGLLAIGQIAKEYNLYTKMTGSQ
RIGMFGAQKDDLPAIWSKLLAAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGFGVTL
EHRYKGIRTPHKMKFGVSGCTRECAEAQGKDVGIIATENGWNLYVCGNGGMKPRHADLLA
ADLDRETLVRYLDRFMMFYIRTADKLQRTSVWLESLEGGIDYLRKVIVDDKLGINDQLEA
EIARLRDAVVCEWKETVEHPETQLRFAHFINSPLRDPNVQVVAERDQHRPARPDERIPVT
LIDTEESHA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagtcaaacttgccgtcgtcggcaatggcatggtcggccaccggttcatcgaa
gatctgttggataaagcagacaaagaccagttcgaaatcaccgtcttttgcgaagagcca
cgcatcgcttacgatcgcgtgcacctttcctcctacttctcgcaccacaccgccgaagag
ctgtcgctggtgcgcgaaggcttttacgaaaaacacggcgtaaaggtactggtcggcgaa
cgcgctatcaccatcaatcgcgacgagaaggtcatccactccaacaccggccgcaccgtc
tattacgacaagctgatcatggccaccggctcctatccgtggatcccgccgattaagggc
tcggatagccaggactgcttcgtttaccgtaccatcgaagacctgaacgccatcgaagcc
tgcgcgcgccgcagcaaacgcggtgcggtagtcggcggcgggctgttagggctggaagcc
gccggcgcgctgaaaagcctgggggtggaaacacacgtgatcgagttcgctccggtactg
atggccgaacagctcgacccgatgggcggtgaccagctgcgccgcaagatcgagcgcatg
ggcgtcaaggttcacaccggcaaaaatacccaggagatcgtcaacggcggcggcacggcg
cgcaaaaccatgcatttcgccgacggtagcctgctggaagtggatttcatcgtgttctcc
accggcatccgcgcccaggacaagctggcgcgtcagtgcgggctggaggttggccgccgc
ggcggcatcgccatcaacgacagctgccaaacgtctgatccggacgtgtacgccatcggt
gagtgcgccgcctggcgcgatcgcacctttggcctggtggcgccgggatacaaaatggcg
caggtggccgccgatcatctgctgggccgcgaaaacggcttccagggcgccgacatgagc
gccaagctgaagctgctgggcgtggacgtcggcggcatcggcgatgcccatggccgcacc
gaaggcgcccgcagctacgtttatctggatgaaagcaaagaagtctacaaacgtatcgtg
gtcagcgccgacaataaaaccctgctcggcgcggtgctggtaggcgacaccagcgattat
ggcaacctgctgcagctggcgttgaacggcatcgagctgccggaaaacccggacggcctg
atcctgccggcccatgcgggcagcaaaccggccatcggcgtggattcgctgccggaaagc
gcgcagatctgctcctgcttcgacgtcagcaaaggcgacatcatccaggcggtcaacaaa
ggctgccacaccgtggcggcgctgaaggccgaaaccaaggccggcaccggctgcggcggc
tgcatcccgctgctcacccaggtgttgaacgccgagctgagcaaacagggcatcgaggtc
aaccaccacctgtgcgaacacttcgcctattcacgccaggagctgttccacctgatccgc
gtcgaaggcatcaagtcgttcgaggcattgctggccaaatacggcaaaggttacggctgc
gaagtgtgtaaaccaaccgtcggctcgttgctggcctcgtgctggaacgaatacatcctc
aagccacagcatacgccgctgcaggataccaacgacaacttcctcggcaatatccagaaa
gacggcacctactcggtgatcccgcgctccgccggcggcgaaatcaccccggacggcctg
ctggccatcggccagatcgccaaggaatacaacctctacaccaaaatgaccggctcgcag
cgcatcggcatgttcggggcgcagaaagacgatctgccggccatctggagcaagctgctc
gccgccggctttgaaaccggccacgcgtatgccaaggcgctgcgcatggcgaaaacctgc
gtcggcagcacctggtgccgctatggcgtcggcgacagcgtcggcttcggcgtcacgctg
gaacatcgctacaaaggtatccgcaccccgcacaaaatgaagttcggcgtctcgggctgt
acccgcgaatgcgccgaggcgcagggtaaggacgtcggcatcattgccaccgagaacggc
tggaacctgtatgtttgcggcaacggcggcatgaaaccgcgccacgccgatctgctggcc
gccgatctcgatcgcgagaccctagtgcgctacctcgaccgcttcatgatgttctatatc
cgcaccgccgataagctgcagcgtacctcggtatggctggagagcctggaaggcggcatc
gattacctgcgcaaggtgatcgtcgacgacaagctcggcatcaacgaccaactggaagcg
gagatcgcccgcctgcgcgacgcggtggtctgcgagtggaaagagaccgtcgagcatccg
gaaacgcagctgcgcttcgcccacttcatcaacagcccgctgcgcgatccgaacgtgcag
gtggtggccgaacgcgaccagcaccgcccggcgcgccctgacgagcgcattcccgtcacc
ctgatcgataccgaggagagccacgcatga
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