Serratia marcescens subsp. marcescens Db11: SMDB11_3871
Help
Entry
SMDB11_3871 CDS
T03985
Name
(GenBank) putative RNA-binding protein
KO
K06959
protein Tex
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
SMDB11_3871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
S1
HHH_9
HHH_7
S1_RRP5
YqgF
T2SSK
Spt6_S1
HHH_6
Motif
Other DBs
NCBI-ProteinID:
CDG14432
UniProt:
A0ABC9INW6
LinkDB
All DBs
Position
4110585..4112918
Genome browser
AA seq
777 aa
AA seq
DB search
MNDPLSRIIATELQARPEQVDSAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLG
YLRELEDRRQTILKSIDEQGKLTEQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEA
GLEPLADTLWQDPQQQPEQLAERYVDADKGVADVKAALDGARYILMERFAEDAALLAKVR
DYLWKNAHLVSKVVEGKEDEGAKFRDYFDHHEPISQVPSHRALAMFRGRNEGVLQLALNA
DPQFEEAPRESQAELIIINHLNLRLNNAPADAWRKAVVNWTWRIKVLLHLETELMGTVRE
RAEDEAINVFARNMHDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTVYPHT
GQAAKAAAIVAALCIKHNVELVAIGNGTASRETERFYLDLQKQFSDVRAQKVIVSEAGAS
VYSASELAALEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDSVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVNWRDENGRFSNREQLLKVSR
LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVQRILAATEQALQDLMGNASAVRSLK
AVDFTDDKFGVPTVTDILKELEKPGRDPRPEFKTATFAEGVETLNDLQPGMILEGSVTNV
TNFGAFVDIGVHQDGLVHISSLADKFVEDPHTVVKAGDIVKVKVMEVDLQRKRIALSMRL
DEQPGEGSPRRGGNAPAQARDNANRSAGGNKAKPRNATPAGNSAMGDALAAAFGKKR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacccactgagccgcattattgcaacagaactgcaggcccggccggagcaagtc
gactccgccatccgtctgctggatgaaggtaataccgtgccctttattgcacgctatcgt
aaggaagtcaccgggggcctggacgacacccaactgcgccagctggaaacccgcctgggt
tatctgcgtgaactggaagatcgtcgtcagaccatcctgaagtcgatcgatgaacagggc
aaactgaccgaacagctggcgggggcgatcaacgccacgctgagcaagaccgaactcgaa
gacctctacctgccgtacaaaccgaagcgccgcacccgtggccagatcgccatcgaagcc
ggtctggaaccgctggcggacacgctgtggcaggatccgcaacagcagccggaacagctg
gctgaacgctacgtcgacgccgacaagggcgtggcggacgtgaaagccgccctcgacggc
gcgcgctatatcctgatggagcgcttcgccgaagacgccgcgctgctggccaaggtgcgc
gactacctgtggaaaaacgcccatctggtgtccaaagtggtcgagggcaaggaagacgaa
ggcgccaagttccgcgactacttcgatcaccacgaaccgatttcccaggtgccttcgcac
cgcgcgctggcaatgttccgcggccgcaacgaaggtgtgctgcagctggcgctgaacgcc
gatccgcaatttgaggaagcgccgcgcgaaagccaggcggagctgatcatcatcaatcac
ctcaacctacgtctgaataacgccccggccgatgcctggcgcaaggcggtggtcaactgg
acctggcgtatcaaagtgctgctgcacctggaaaccgagctgatgggcacggtgcgcgag
cgcgcggaagatgaagcgatcaacgtgttcgcccgcaacatgcatgatctgctgatggcc
gcgccggccggcatgcgcgccaccatgggcctcgatccaggcctgcgcaccggggtgaaa
gtcgccgtggtcgacgcgaccggtaaactggtggccaccgacaccgtctatccgcacacc
gggcaagcggccaaagccgccgccatcgtcgcggcgctgtgcatcaaacacaatgtagag
ctggtggccatcggcaacggcaccgcttcgcgtgagaccgagcgtttctatctcgacctg
caaaagcagttcagcgacgtccgggcgcagaaagtgatcgtcagcgaagcgggcgcatcg
gtgtactccgcgtcagaactggcggcgctggaattcccggatctcgacgtgtcgctgcgc
ggcgcggtatccattgcccgtcgcctgcaggatccgctggcggagctggtgaagatcgat
ccgaaatccatcggcgtcggccagtatcagcacgacgtcagccagagccagttggcgaag
aagctggattcggtggtggaagactgcgtgaacgccgtcggcgtcgatctgaacaccgca
tcggtaccattgctgacccgcgtggccggcctgacacgcatgatggcgcagaacatcgtc
aactggcgcgacgagaacggccgcttcagcaaccgtgaacagctgctgaaagtcagccgt
ctggggccgaaggccttcgaacagtgcgccggcttcctgcgcatcaaccacggcgacaac
ccgctggatgcctccaccgttcacccggaagcctacccggtggtgcagcgcatcctggcc
gccaccgagcaggcgctgcaggacctgatgggcaacgcctcggcggtgcgcagcctgaaa
gcggtcgatttcaccgacgacaagttcggcgtgccgacggtcaccgacatcctgaaagag
ctggagaagccgggccgcgacccgcgtccggagttcaaaaccgccacctttgccgaaggc
gtggaaaccctcaacgatctgcagccggggatgatcctggaagggtcggtcactaacgtc
accaacttcggcgccttcgtggatatcggcgtgcatcaggatggcctggtgcacatctcc
tcgctggcggacaagttcgtcgaagatccgcacaccgtggtgaaggccggcgacatcgtc
aaagtgaaggtgatggaagtcgatctgcagcgtaaacgcatcgcgctgagcatgcgcctg
gatgagcaaccgggcgaaggttcaccgcgccgcggcggcaacgcgccagcacaggcacgc
gacaacgccaaccgttcggcgggcggcaacaaagccaaaccgcgcaatgcgacgccggcc
ggcaacagcgccatgggcgacgcgctggcggcggcgttcggcaagaaacgctaa
DBGET
integrated database retrieval system
